RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 GPR146Q96CH1 333 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 ATOH8Q96SQ7 321 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 FSCN3Q9NQT6 498 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 ZNF214Q9UL59 606 aaPredicted RBP7.81□□□□□ -1.16
VPS13D-212ENST00000543766 ICAM5Q9UMF0 924 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 HDGFL3Q9Y3E1 203 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.81□□□□□ -1.16
VPS13D-212ENST00000543766 J3KR12 359 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 GRAP2O75791 330 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 H3F3AP84243 136 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 MEF2BQ02080 365 aaPredicted RBP7.81□□□□□ -1.16
VPS13D-212ENST00000543766 EIF2B1Q14232 305 aaKnown RBP7.81□□□□□ -1.16
VPS13D-212ENST00000543766 AADACL3Q5VUY0 350 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 ZNF730Q6ZMV8 503 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 TMEM91Q6ZNR0 172 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 CD99L2Q8TCZ2 262 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 XAGE5Q8WWM1 108 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 GRAMD2BQ96HH9 432 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 DPH2Q9BQC3 489 aaPredicted RBP7.81□□□□□ -1.16
VPS13D-212ENST00000543766 ORAI3Q9BRQ5 295 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 POLR2J3Q9H1A7 115 aaKnown RBP7.81□□□□□ -1.16
VPS13D-212ENST00000543766 FGF21Q9NSA1 209 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 NAT8Q9UHE5 227 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 TIMM10BQ9Y5J6 103 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 GGT3PA6NGU5 568 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 NKX2-8O15522 239 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 SIX3O95343 332 aaPredicted RBP7.81□□□□□ -1.16
VPS13D-212ENST00000543766 HPNP05981 417 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 NGFRP08138 427 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 HIST1H3AP68431 136 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 RPEL1Q2QD12 228 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 Q6ZPB1 254 aaPredicted RBP7.81□□□□□ -1.16
VPS13D-212ENST00000543766 OAFQ86UD1 273 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 NPEPL1Q8NDH3 523 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 ZNRF4Q8WWF5 429 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 LINC00477Q96M19 166 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 KCNJ16Q9NPI9 418 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 COMMD9Q9P000 198 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 OR5V1Q9UGF6 321 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 KIAA1671Q9BY89 1806 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 A0A087WUJ7 227 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 MEGF11A6BM72 1044 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 SERINC4A6NH21 518 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 E7EQ34 232 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 H3BMH7 237 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 TFPIP10646 304 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 TGFBR3Q03167 851 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 NR0B2Q15466 257 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 POU2AF1Q16633 256 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 TOMM5Q8N4H5 51 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 LGALS14Q8TCE9 139 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 NUDT8Q8WV74 236 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 SMIM8Q96KF7 97 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 CABLES2Q9BTV7 478 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 EXOSC3Q9NQT5 275 aaKnown RBP7.8□□□□□ -1.16
VPS13D-212ENST00000543766 A0A0G2JLM5 398 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 KIR2DS5A0A0G2JLQ3 304 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 A0A0G2JNG1 304 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 PHF1O43189 567 aaPredicted RBP7.8□□□□□ -1.16
VPS13D-212ENST00000543766 OPN1SWP03999 348 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 ACP5P13686 325 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 ZNF19P17023 458 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 CD33P20138 364 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 KIR2DS5Q14953 304 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 HIST3H3Q16695 136 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 PLAG1Q6DJT9 500 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 PWWP2BQ6NUJ5 590 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 ABHD6Q9BV23 337 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 WIPI2Q9Y4P8 454 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 TNRC6AQ8NDV7 1962 aaKnown RBP7.8□□□□□ -1.16
VPS13D-212ENST00000543766 NYNRINQ9P2P1 1898 aaKnown RBP7.8□□□□□ -1.16
VPS13D-212ENST00000543766 A0A0G2JMM0 328 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 KIR2DS1A0A191URI9 304 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 A0A1W2PPB8 328 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 C1orf226A1L170 272 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 PSMB11A5LHX3 300 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 ZNF724A8MTY0 619 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 KIR3DP1A8MWS1 328 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 KIAA1324LA8MWY0 1029 aaPredicted RBP7.8□□□□□ -1.16
VPS13D-212ENST00000543766 UMAD1C9J7I0 102 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 RPL7P18124 248 aaKnown RBP7.8□□□□□ -1.16
VPS13D-212ENST00000543766 SRD5A2P31213 254 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 KIR2DS1Q14954 304 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 RAB35Q15286 201 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 CXorf66Q5JRM2 361 aaPredicted RBP7.8□□□□□ -1.16
VPS13D-212ENST00000543766 GLIPR1L1Q6UWM5 242 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 MBOAT2Q6ZWT7 520 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 PCED1BQ96HM7 432 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 FAM124BQ9H5Z6 455 aaPredicted RBP7.8□□□□□ -1.16
VPS13D-212ENST00000543766 BARX1Q9HBU1 254 aaPredicted RBP7.8□□□□□ -1.16
VPS13D-212ENST00000543766 TMEM9BQ9NQ34 198 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 HEYLQ9NQ87 328 aaPredicted RBP7.8□□□□□ -1.16
VPS13D-212ENST00000543766 SLC2A6Q9UGQ3 507 aa7.8□□□□□ -1.16
VPS13D-212ENST00000543766 YLPM1P49750 1951 aaKnown RBP7.79□□□□□ -1.16
VPS13D-212ENST00000543766 IGKV6D-21A0A0A0MT36 114 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 A0A0J9YW62 118 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 PRAF2O60831 178 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 SRP14P37108 136 aaKnown RBP7.79□□□□□ -1.16
VPS13D-212ENST00000543766 C3AR1Q16581 482 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 TMEM196Q5HYL7 178 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms