RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 ACTA2P62736 377 aa10.62□□□□□ -0.71
RTN3-212ENST00000543123 ACTG2P63267 376 aa10.62□□□□□ -0.71
RTN3-212ENST00000543123 IL18R1Q13478 541 aa10.62□□□□□ -0.71
RTN3-212ENST00000543123 MEDAGQ5VYS4 303 aa10.62□□□□□ -0.71
RTN3-212ENST00000543123 UTS2BQ765I0 119 aa10.62□□□□□ -0.71
RTN3-212ENST00000543123 LHFPL4Q7Z7J7 247 aa10.62□□□□□ -0.71
RTN3-212ENST00000543123 FAM58AQ8N1B3 248 aa10.62□□□□□ -0.71
RTN3-212ENST00000543123 PRSS35Q8N3Z0 413 aa10.62□□□□□ -0.71
RTN3-212ENST00000543123 ZNF676Q8N7Q3 588 aa10.62□□□□□ -0.71
RTN3-212ENST00000543123 CFHR4Q92496 578 aa10.62□□□□□ -0.71
RTN3-212ENST00000543123 SIGLEC9Q9Y336 463 aa10.62□□□□□ -0.71
RTN3-212ENST00000543123 SESN1Q9Y6P5 492 aa10.62□□□□□ -0.71
RTN3-212ENST00000543123 DAPL1A0PJW8 107 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 SAC3D1A6NKF1 404 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 F8VVB4 439 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 F8VWA3 439 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 MGST3O14880 152 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 SLC16A6O15403 523 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 INMTO95050 263 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 OPN1MWP04001 364 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 OPN1MW2P0DN77 364 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 OPN1MW3P0DN78 364 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 AZGP1P25311 298 aaKnown RBP10.61□□□□□ -0.71
RTN3-212ENST00000543123 PAX6P26367 422 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 POLR2IP36954 125 aaKnown RBP10.61□□□□□ -0.71
RTN3-212ENST00000543123 POU3F4P49335 361 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 ZNF91Q05481 1191 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 ZNF146Q15072 292 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 SSX2Q16385 188 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 TP53I3Q53FA7 332 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 PLA1AQ53H76 456 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 ARSJQ5FYB0 599 aaPredicted RBP10.61□□□□□ -0.71
RTN3-212ENST00000543123 TRAPPC6BQ86SZ2 158 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 OR4S1Q8NGB4 309 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 OR2G2Q8NGZ5 317 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 NDNFQ8TB73 568 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 PIFOQ8TCI5 191 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 PRSS22Q9GZN4 317 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 GAL3ST2Q9H3Q3 398 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 RHOFQ9HBH0 211 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 HHLA2Q9UM44 414 aa10.61□□□□□ -0.71
RTN3-212ENST00000543123 UBE2J1Q9Y385 318 aaPredicted RBP10.61□□□□□ -0.71
RTN3-212ENST00000543123 TMEM82A0PJX8 343 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 SH2D1BO14796 132 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 FBXO24O75426 580 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 HTR1AP08908 422 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 PRKACAP17612 351 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 ATF1P18846 271 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 ERP29P30040 261 aaKnown RBP10.6□□□□□ -0.71
RTN3-212ENST00000543123 KIR3DL2P43630 455 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 CCR9P51686 369 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 P2RX3P56373 397 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 ZNF85Q03923 595 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 SLC25A30Q5SVS4 291 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 OR52W1Q6IF63 320 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 FDX2Q6P4F2 183 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 Q8N2B8 174 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 ACBD7Q8N6N7 88 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 CAPSLQ8WWF8 208 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 FGGYQ96C11 551 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 RNFT2Q96EX2 444 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 ADAT3Q96EY9 351 aaPredicted RBP10.6□□□□□ -0.71
RTN3-212ENST00000543123 AKR1E2Q96JD6 320 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 HRASLS5Q96KN8 279 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 OPALINQ96PE5 141 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 MBOAT4Q96T53 435 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 CLEC7AQ9BXN2 247 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 CHST6Q9GZX3 395 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 TMEM133Q9H2Q1 129 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 ZNF702PQ9H963 129 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 EXOSC4Q9NPD3 245 aaKnown RBP10.6□□□□□ -0.71
RTN3-212ENST00000543123 RBFOX1Q9NWB1 397 aaKnown RBP10.6□□□□□ -0.71
RTN3-212ENST00000543123 FOXJ3Q9UPW0 622 aa10.6□□□□□ -0.71
RTN3-212ENST00000543123 TRGV10A0A0A0MS01 117 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 IGHV2-26A0A0B4J1V2 119 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 A6NDX4 124 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 ENTPD6O75354 484 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 IGHA1P01876 353 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 ALPLP05186 524 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 BCL3P20749 454 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 HTR1DP28221 377 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 SNRPGP62308 76 aaKnown RBP10.59□□□□□ -0.71
RTN3-212ENST00000543123 EMX1Q04741 257 aaPredicted RBP10.59□□□□□ -0.71
RTN3-212ENST00000543123 SLC34A1Q06495 639 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 PDZK1IP1Q13113 114 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 ZFP1Q6P2D0 407 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 TMEM219Q86XT9 240 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 C1QL4Q86Z23 238 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 C10orf67Q8IYJ2 551 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 RDH10Q8IZV5 341 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 C11orf44Q8N8P7 122 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 OR13C3Q8NGS6 347 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 CPNE2Q96FN4 548 aaPredicted RBP10.59□□□□□ -0.71
RTN3-212ENST00000543123 HMG20AQ9NP66 347 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 FRRS1LQ9P0K9 344 aa10.59□□□□□ -0.71
RTN3-212ENST00000543123 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.59□□□□□ -0.71
RTN3-212ENST00000543123 DSCAML1Q8TD84 2053 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 IGKV1-9A0A0C4DH69 117 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 MEX3AA1L020 520 aaKnown RBP10.58□□□□□ -0.72
RTN3-212ENST00000543123 MEGF11A6BM72 1044 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms