RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 LINC01548A6NM66 108 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 ANKRD65E5RJM6 399 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 ARPC3O15145 178 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 IDH3BO43837 385 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 ZNF737O75373 536 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 HSPB1P04792 205 aaKnown RBP7.23□□□□□ -1.25
YBX3-211ENST00000541351 IFNA4P05014 189 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 LGALS1P09382 135 aaKnown RBP7.23□□□□□ -1.25
YBX3-211ENST00000541351 ATP6V1B1P15313 513 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 ANOS1P23352 680 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 ERP29P30040 261 aaKnown RBP7.23□□□□□ -1.25
YBX3-211ENST00000541351 SLC6A6P31641 620 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 HAAOP46952 286 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 MRPL19P49406 292 aaKnown RBP7.23□□□□□ -1.25
YBX3-211ENST00000541351 ZNF121P58317 390 aaPredicted RBP7.23□□□□□ -1.25
YBX3-211ENST00000541351 GALEQ14376 348 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 GRK1Q15835 563 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 VMACQ2NL98 169 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 KLHL12Q53G59 568 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 CEP78Q5JTW2 689 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 PLCXD3Q63HM9 321 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 ENTHD1Q8IYW4 607 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 TSPEARQ8WU66 669 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 PHLDA1Q8WV24 401 aaPredicted RBP7.23□□□□□ -1.25
YBX3-211ENST00000541351 FAM46AQ96IP4 442 aaKnown RBP7.23□□□□□ -1.25
YBX3-211ENST00000541351 TOLLIPQ9H0E2 274 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 ANKRD19PQ9H560 264 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 PLEKHA3Q9HB20 300 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 DCAF13Q9NV06 445 aaKnown RBP7.23□□□□□ -1.25
YBX3-211ENST00000541351 MRPL22Q9NWU5 206 aaKnown RBP7.23□□□□□ -1.25
YBX3-211ENST00000541351 NDE1Q9NXR1 346 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 OR6C3Q9NZP0 311 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 RHCGQ9UBD6 479 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 PIGLQ9Y2B2 252 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 PKHD1P08F94 4074 aa7.23□□□□□ -1.25
YBX3-211ENST00000541351 A0A087X0M5 115 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 A0A1B0GX30 115 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 DLGAP1O14490 977 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 MGST3O14880 152 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 GSC2O15499 205 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 TNFRSF1BP20333 461 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 ZP3P21754 424 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 GABRR1P24046 479 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 FMO3P31513 532 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 PTGFRP43088 359 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 BLVRAP53004 296 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 CD81P60033 236 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 EBI3Q14213 229 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 PAGE3Q5JUK9 113 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 ZNF684Q5T5D7 378 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 PRAMEF5Q5TYX0 476 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 TCF23Q7RTU1 214 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 CYP4Z1Q86W10 505 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.22□□□□□ -1.25
YBX3-211ENST00000541351 OR2K2Q8NGT1 345 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 OR4K13Q8NH42 304 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.22□□□□□ -1.25
YBX3-211ENST00000541351 RSRC1Q96IZ7 334 aaKnown RBP7.22□□□□□ -1.25
YBX3-211ENST00000541351 TMEM120AQ9BXJ8 343 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 KAT8Q9H7Z6 458 aaKnown RBP7.22□□□□□ -1.25
YBX3-211ENST00000541351 HES4Q9HCC6 221 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 ETAA1Q9NY74 926 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 CCDC167Q9P0B6 97 aa7.22□□□□□ -1.25
YBX3-211ENST00000541351 IGHV4OR15-8A0A075B7B6 117 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 A0A087WUU8 490 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 A0A087WW49 117 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 A0A0J9YWU9 116 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 A0A1W2PPI3 338 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 FAM107AO95990 144 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 KITP10721 976 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 ACKR3P25106 362 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 CD40LGP29965 261 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 BMI1P35226 326 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 P2RX3P56373 397 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 MTPNP58546 118 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 RAB40BQ12829 278 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 TATDN3Q17R31 274 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 TMEM177Q53S58 311 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 TEX30Q5JUR7 227 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 PYHIN1Q6K0P9 492 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 ERICH5Q6P6B1 374 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 MOB3CQ70IA8 216 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 HAPLN4Q86UW8 402 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 IZUMO1Q8IYV9 350 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 Q8N1X5 172 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 MREGQ8N565 214 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 Q8N9W7 124 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 OR10A6Q8NH74 314 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 CGREF1Q99674 301 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 SH3GL1Q99961 368 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 MFFQ9GZY8 342 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 SEBOXQ9HB31 216 aaPredicted RBP7.21□□□□□ -1.26
YBX3-211ENST00000541351 ZNF286AQ9HBT8 521 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 BRD7Q9NPI1 651 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 THAP1Q9NVV9 213 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 DNAJC27Q9NZQ0 273 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 SLC7A11Q9UPY5 501 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 COMMD3-BMI1R4GMX3 469 aa7.21□□□□□ -1.26
YBX3-211ENST00000541351 FAM172BPA6NC97 362 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 UNC119BA6NIH7 251 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms