RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 VSIG4Q9Y279 399 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 A0A1B0GTQ1 180 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 RER1O15258 196 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 CTSVO60911 334 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 ZGLP1P0C6A0 271 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 ZFP36L2P47974 494 aaKnown RBP13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 TCTN1Q2MV58 587 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 CEACAM16Q2WEN9 425 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 MESTQ5EB52 335 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 KCNK15Q9H427 330 aa13.27□□□□□ -0.28
SMARCA4-207ENST00000541122 C11orf94C9JXX5 98 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 PITX3O75364 302 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 PGA4P0DJD7 388 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 PGA5P0DJD9 388 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 OR10X1Q8NGY0 326 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 FLRT3Q9NZU0 649 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 K7ERU9 68 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 OR5I1Q13606 314 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 MOGAT1Q96PD6 335 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 SH2D2AQ9NP31 389 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 TRAV8-7A0A075B6U6 113 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 M0R2Z0 102 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 TNFSF11O14788 317 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 PRKNO60260 465 aaPredicted RBP13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 CLEC3BP05452 202 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 ATG4DQ86TL0 474 aaPredicted RBP13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 TBC1D26Q86UD7 250 aa13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 H1FOOQ8IZA3 346 aaPredicted RBP13.27□□□□□ -0.29
SMARCA4-207ENST00000541122 YIF1AO95070 293 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 RPS4Y1P22090 263 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 HOXA6P31267 233 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 RBPJQ06330 500 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 DCAF12L2Q5VW00 463 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 ASB5Q8WWX0 329 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 BCL2L2Q92843 193 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 IL17BQ9UHF5 180 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 HEXAP06865 529 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 ZNF718Q3SXZ3 478 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 ETV3LQ6ZN32 361 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 ADAD2Q8NCV1 583 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 MCHR2Q969V1 340 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 ESRP2Q9H6T0 727 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 BARX1Q9HBU1 254 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 KLF13Q9Y2Y9 288 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 DSPPQ9NZW4 1301 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 PTP4A3O75365 173 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 CYB5R3P00387 301 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 CFDP00746 253 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 ANKRD34CP0C6C1 535 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 VAX1Q5SQQ9 334 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 LINC00696Q6ZRV3 163 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 HOGA1Q86XE5 327 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 ASB10Q8WXI3 467 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 HES4Q9HCC6 221 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 SOCS1O15524 211 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 SEMA7AO75326 666 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 DDTP30046 118 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 CEACAM6P40199 344 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 RPS16P62249 146 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 LDLRAD3Q86YD5 345 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 TMEM56Q96MV1 263 aa13.26□□□□□ -0.29
SMARCA4-207ENST00000541122 A0A096LPE4 126 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 A0A1W2PPZ6 126 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 A0A1W2PQD3 144 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 A6NDN8 102 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 CXorf65A6NEN9 183 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 VN1R4Q7Z5H5 301 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 SLC35E3Q7Z769 313 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 CHST1O43916 411 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 HOXD4P09016 255 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 OR5AL1P0C617 328 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 C21orf62-AS1Q17RA5 79 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 OR8B12Q8NGG6 310 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 RCC2Q9P258 522 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 IGHV3-15A0A0B4J1V0 119 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 LOC105371267A0A1B0GV96 52 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 CRYM-AS1A6NIL9 109 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 TRDCB7Z8K6 153 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 HOXC4P09017 264 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 MMP9P14780 707 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 FSTP19883 344 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 HLA-BQ31612 363 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 CA5BP1Q8WTZ4 195 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 ATOH1Q92858 354 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 ANKRD10Q9NXR5 420 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 GLI3P10071 1580 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 CTXND1A0A1B0GTU2 59 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 NGFP01138 241 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 LGALS4P56470 323 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 MPV17LQ2QL34 196 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 DHRS7BQ6IAN0 325 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 VWA1Q6PCB0 445 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 OR6X1Q8NH79 312 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 PRSS3P2Q8NHM4 247 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 ADIPOR1Q96A54 375 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 MS4A3Q96HJ5 214 aa13.25□□□□□ -0.29
SMARCA4-207ENST00000541122 ZNF207O43670 478 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 HSPB1P04792 205 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 FCARP24071 287 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 HTR1DP28221 377 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms