RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 FAM90A8PA6NJQ4 464 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 VGLL3A8MV65 326 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 INMTO95050 263 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 MT-ND2P03891 347 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 DBTP11182 482 aaKnown RBP12.02□□□□□ -0.49
DDX11-217ENST00000540935 GABRB1P18505 474 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 GABRA5P31644 462 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 POU3F4P49335 361 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 BMXP51813 675 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 KRTAP10-3P60369 221 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 ZNF91Q05481 1191 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 RAB40BQ12829 278 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 PDZK1IP1Q13113 114 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 ALKBH1Q13686 389 aaKnown RBP12.02□□□□□ -0.49
DDX11-217ENST00000540935 ASPHD2Q6ICH7 369 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 ZNF782Q6ZMW2 699 aaPredicted RBP12.02□□□□□ -0.49
DDX11-217ENST00000540935 ZNF676Q8N7Q3 588 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 OR11H6Q8NGC7 330 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 OR4C13Q8NGP0 309 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 OR13C3Q8NGS6 347 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 RHOXF1Q8NHV9 184 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 MALSU1Q96EH3 234 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 ALG8Q9BVK2 526 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 CDCA4Q9BXL8 241 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 RBFOX1Q9NWB1 397 aaKnown RBP12.02□□□□□ -0.49
DDX11-217ENST00000540935 PCDHGB5Q9Y5G0 923 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 LINC00312Q9Y6C7 94 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 TRRAPQ9Y4A5 3859 aa12.02□□□□□ -0.49
DDX11-217ENST00000540935 DSCAML1Q8TD84 2053 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 TMEM82A0PJX8 343 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 OR4C45A6NMZ5 311 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 EBAG9O00559 213 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 MGST3O14880 152 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 WIPF1O43516 503 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 IGHA1P01876 353 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 ARG1P05089 322 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 IGHV1-8P0DP01 117 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 BCL3P20749 454 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 GABRR1P24046 479 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 KIR2DS4P43632 304 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 NPBWR2P48146 333 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 EDDM3AQ14507 147 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 GRK1Q15835 563 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 LY6EQ16553 131 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 ZNF626Q68DY1 528 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 CRIP3Q6Q6R5 217 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 ZBTB49Q6ZSB9 765 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 NPFFR1Q9GZQ6 430 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 S100A14Q9HCY8 104 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 HMG20AQ9NP66 347 aa12.01□□□□□ -0.49
DDX11-217ENST00000540935 RPL36Q9Y3U8 105 aaKnown RBP12.01□□□□□ -0.49
DDX11-217ENST00000540935 LOC100130705A0A1B0GUX0 176 aa12□□□□□ -0.49
DDX11-217ENST00000540935 FUOMA2VDF0 154 aa12□□□□□ -0.49
DDX11-217ENST00000540935 TMEM212A6NML5 194 aa12□□□□□ -0.49
DDX11-217ENST00000540935 ODF3BA8MYP8 253 aa12□□□□□ -0.49
DDX11-217ENST00000540935 SH2D1BO14796 132 aa12□□□□□ -0.49
DDX11-217ENST00000540935 ALX3O95076 343 aa12□□□□□ -0.49
DDX11-217ENST00000540935 CCDC159P0C7I6 412 aa12□□□□□ -0.49
DDX11-217ENST00000540935 PRKACAP17612 351 aa12□□□□□ -0.49
DDX11-217ENST00000540935 ERP29P30040 261 aaKnown RBP12□□□□□ -0.49
DDX11-217ENST00000540935 KLHL22Q53GT1 634 aa12□□□□□ -0.49
DDX11-217ENST00000540935 LHFPL3Q86UP9 236 aa12□□□□□ -0.49
DDX11-217ENST00000540935 SERPINA12Q8IW75 414 aa12□□□□□ -0.49
DDX11-217ENST00000540935 SAXO1Q8IYX7 474 aa12□□□□□ -0.49
DDX11-217ENST00000540935 PQLC1Q8N2U9 271 aa12□□□□□ -0.49
DDX11-217ENST00000540935 OR51A4Q8NGJ6 313 aa12□□□□□ -0.49
DDX11-217ENST00000540935 OR5D14Q8NGL3 314 aa12□□□□□ -0.49
DDX11-217ENST00000540935 OR2T6Q8NHC8 308 aa12□□□□□ -0.49
DDX11-217ENST00000540935 CPNE2Q96FN4 548 aaPredicted RBP12□□□□□ -0.49
DDX11-217ENST00000540935 COMMD4Q9H0A8 199 aa12□□□□□ -0.49
DDX11-217ENST00000540935 ZCCHC4Q9H5U6 513 aa12□□□□□ -0.49
DDX11-217ENST00000540935 EXOSC4Q9NPD3 245 aaKnown RBP12□□□□□ -0.49
DDX11-217ENST00000540935 ABCB10Q9NRK6 738 aa12□□□□□ -0.49
DDX11-217ENST00000540935 PITPNC1Q9UKF7 332 aa12□□□□□ -0.49
DDX11-217ENST00000540935 UBE2J1Q9Y385 318 aaPredicted RBP12□□□□□ -0.49
DDX11-217ENST00000540935 PSPNO60542 156 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 KDM4BO94953 1096 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 C2orf68Q2NKX9 166 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 MINOS1Q5TGZ0 78 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 TCF23Q7RTU1 214 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 LHFPL4Q7Z7J7 247 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 PARP16Q8N5Y8 322 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 OR52N4Q8NGI2 321 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 OR13C9Q8NGT0 318 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 OR10AC1Q8NH08 325 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 OR5AK2Q8NH90 309 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 RPS4Y2Q8TD47 263 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 RDH12Q96NR8 316 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 SLC29A1Q99808 456 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 CHST6Q9GZX3 395 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 MRPS18AQ9NVS2 196 aaKnown RBP11.99□□□□□ -0.49
DDX11-217ENST00000540935 FAM118AQ9NWS6 357 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 ERVK13-1Q9NX77 482 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 IL36RNQ9UBH0 155 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 AASSQ9UDR5 926 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 MYRFQ9Y2G1 1151 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 SESN1Q9Y6P5 492 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 MINOS1-NBL1R4GNA1 71 aa11.99□□□□□ -0.49
DDX11-217ENST00000540935 ZFPL1O95159 310 aa11.98□□□□□ -0.49
DDX11-217ENST00000540935 LMO1P25800 156 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms