RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 FCGR3AP08637 254 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 MAB21L1Q13394 359 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 MEF2DQ14814 521 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 CDSNQ15517 529 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 MPPED2Q15777 294 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 VHLLQ6RSH7 139 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 OR13G1Q8NGZ3 307 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 MUCL1Q96DR8 90 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 MICU1Q9BPX6 476 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 PKIBQ9C010 78 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 LIME1Q9H400 295 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 TMEM100Q9NV29 134 aa10.42□□□□□ -0.74
AP003559.1-201ENST00000540906 POLEQ07864 2286 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 LRP5LA4QPB2 252 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 C16orf97H3BN30 126 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 HSPB6O14558 160 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 TFF1P04155 84 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 IL5P05113 134 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 SULT1A3P0DMM9 295 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 SULT1A4P0DMN0 295 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 CBX5P45973 191 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 ERVK11-1P61568 191 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 RBPJQ06330 500 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 ZNF718Q3SXZ3 478 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 NHLRC3Q5JS37 347 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 VAX1Q5SQQ9 334 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 TMED4Q7Z7H5 227 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 WFDC8Q8IUA0 241 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 CMSS1Q9BQ75 279 aaKnown RBP10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 VKORC1Q9BQB6 163 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 SYT3Q9BQG1 590 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 CA10Q9NS85 328 aa10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 RCC2Q9P258 522 aaKnown RBP10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 CHD3Q12873 2000 aaKnown RBP10.41□□□□□ -0.74
AP003559.1-201ENST00000540906 TMEM82A0PJX8 343 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 ZSCAN5BA6NJL1 495 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 WNT9BO14905 357 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 FUT3P21217 361 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 CD40P25942 277 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 CA7P43166 264 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 IKZF1Q13422 519 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 CD276Q5ZPR3 534 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 ZNF626Q68DY1 528 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 RGS7BPQ6MZT1 257 aaPredicted RBP10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 FAM58AQ8N1B3 248 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 ADAD2Q8NCV1 583 aaKnown RBP10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 OR5H2Q8NGV7 314 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 TMEM171Q8WVE6 324 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 RND1Q92730 232 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 ELOVL5Q9NYP7 299 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 ZNF69Q9UC07 566 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 DUSP13Q9UII6 198 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 RALYQ9UKM9 306 aaKnown RBP10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 OSGIN2Q9Y236 505 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 PLEKHA6Q9Y2H5 1048 aa10.4□□□□□ -0.74
AP003559.1-201ENST00000540906 TRAV24A0A0B4J272 114 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 DPRXA6NFQ7 191 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 SSNA1O43805 119 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 PRAF2O60831 178 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 PGA5P0DJD9 388 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 GCH1P30793 250 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 CEBPDP49716 269 aaPredicted RBP10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 NPY4RP50391 375 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 C3orf36Q3SXR2 165 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 METTL11BQ5VVY1 283 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 Q6P435 159 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 LHFPL1Q86WI0 220 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 TCTE3Q8IZS6 198 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 MUC20Q8N307 709 aaPredicted RBP10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 ST6GALNAC3Q8NDV1 305 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 MARCH1Q8TCQ1 289 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 NRIP2Q9BQI9 281 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 SLC25A21Q9BQT8 299 aaPredicted RBP10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 ZNF442Q9H7R0 627 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 EHFQ9NZC4 300 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 SCP2D1Q9UJQ7 156 aa10.4□□□□□ -0.75
AP003559.1-201ENST00000540906 ZFYVE26Q68DK2 2539 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 RELNP78509 3460 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 A0A1B0GWJ7 208 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 HAX1O00165 279 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 CRYAAP02489 173 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 ZNF250P15622 560 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 TBPP20226 339 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 GRNP28799 593 aaKnown RBP10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 BAMBIQ13145 260 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 KCNJ8Q15842 424 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 AADACL3Q5VUY0 350 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 OVCH2Q7RTZ1 564 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 OR5AP2Q8NGF4 316 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 RDH5Q92781 318 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 WFIKKN1Q96NZ8 548 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 PRRT1Q99946 306 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 MRPL37Q9BZE1 423 aaKnown RBP10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 WDR13Q9H1Z4 485 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 PCDHB16Q9NRJ7 776 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 UFSP2Q9NUQ7 469 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 ZNF222Q9UK12 451 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 BOLA1Q9Y3E2 137 aa10.39□□□□□ -0.75
AP003559.1-201ENST00000540906 MEIKINA0A087WXM9 373 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A10PA6NDY2 464 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms