RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 CNRIP1Q96F85 164 aaPredicted RBP8.53□□□□□ -1.04
CLDN2-202ENST00000540876 MDC1Q14676 2089 aaKnown RBP8.53□□□□□ -1.04
CLDN2-202ENST00000540876 HEATR5BQ9P2D3 2071 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 ZFP92A6NM28 416 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 NDUFS4O43181 175 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 ABHD16AO95870 558 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 PFN1P07737 140 aaKnown RBP8.53□□□□□ -1.04
CLDN2-202ENST00000540876 TMEM225BP0DP42 221 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 ATP6V0CP27449 155 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 FAM3BP58499 235 aaPredicted RBP8.53□□□□□ -1.04
CLDN2-202ENST00000540876 FOXK1P85037 733 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 ZFP36L1Q07352 338 aaKnown RBP8.53□□□□□ -1.04
CLDN2-202ENST00000540876 DUSP8Q13202 625 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 MLF2Q15773 248 aaPredicted RBP8.53□□□□□ -1.04
CLDN2-202ENST00000540876 FAM90A2PQ658T7 463 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 DPY19L2P2Q6ZN68 376 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 PTPMT1Q8WUK0 201 aaPredicted RBP8.53□□□□□ -1.04
CLDN2-202ENST00000540876 MRPL24Q96A35 216 aaKnown RBP8.53□□□□□ -1.04
CLDN2-202ENST00000540876 NUS1Q96E22 293 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 CTDSP1Q9GZU7 261 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 SDF2L1Q9HCN8 221 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 EHFQ9NZC4 300 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 TAC3Q9UHF0 121 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 C22orf46C9J442 243 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 LATO43561 262 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 PSG1P11464 419 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 HNRNPA1L2Q32P51 320 aaKnown RBP8.53□□□□□ -1.04
CLDN2-202ENST00000540876 LINC01590Q5TEZ4 76 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 PRR27Q6MZM9 219 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 TMEM92Q6UXU6 159 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 MEX3BQ6ZN04 569 aaKnown RBP8.53□□□□□ -1.04
CLDN2-202ENST00000540876 Q6ZWC4 215 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 DPY19L4Q7Z388 723 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 KCNE4Q8WWG9 221 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 C4orf45Q96LM5 186 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 OR6C1Q96RD1 312 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 MEGF9Q9H1U4 602 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 KIR3DX1Q9H7L2 352 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 C1orf123Q9NWV4 160 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 THAP10Q9P2Z0 257 aaPredicted RBP8.53□□□□□ -1.04
CLDN2-202ENST00000540876 SERGEFQ9UGK8 458 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 ST3GAL6Q9Y274 331 aa8.53□□□□□ -1.04
CLDN2-202ENST00000540876 MAP1LC3B2A6NCE7 125 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 AHRRA9YTQ3 701 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 NPIPA2E9PIF3 369 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 H7BYZ3 331 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 RPS4Y1P22090 263 aaKnown RBP8.52□□□□□ -1.05
CLDN2-202ENST00000540876 PSMB5P28074 263 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 FHL1Q13642 323 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 ACTL10Q5JWF8 245 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 CALHM1Q8IU99 346 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 SAXO1Q8IYX7 474 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 DOK4Q8TEW6 326 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 PINX1Q96BK5 328 aaKnown RBP8.52□□□□□ -1.05
CLDN2-202ENST00000540876 SLC25A44Q96H78 314 aaPredicted RBP8.52□□□□□ -1.05
CLDN2-202ENST00000540876 SCGB3A2Q96PL1 93 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 MACROD1Q9BQ69 325 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 MAP1LC3BQ9GZQ8 125 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 C6orf106Q9H6K1 298 aaPredicted RBP8.52□□□□□ -1.05
CLDN2-202ENST00000540876 CLEC5AQ9NY25 188 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 NUP210LQ5VU65 1888 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 K7ERU9 68 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 OR6A2O95222 327 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 NGFRP08138 427 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 CTXN2P0C2S0 81 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 CFPP27918 469 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 PLAURQ03405 335 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 TMEM41BQ5BJD5 291 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 TGIF2LYQ8IUE0 185 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 OR4D6Q8NGJ1 314 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 OR5D18Q8NGL1 313 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 CMTM2Q8TAZ6 248 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 HSPB9Q9BQS6 159 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 MAGT1Q9H0U3 335 aa8.52□□□□□ -1.05
CLDN2-202ENST00000540876 ELL3Q9HB65 397 aaPredicted RBP8.52□□□□□ -1.05
CLDN2-202ENST00000540876 PATZ1Q9HBE1 687 aaKnown RBP8.52□□□□□ -1.05
CLDN2-202ENST00000540876 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.52□□□□□ -1.05
CLDN2-202ENST00000540876 ALPK2Q86TB3 2170 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 TRAV30A0A087WSZ9 112 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 A0A1W2PNV4 684 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 A0A1W2PQF6 199 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 VSTM2BA6NLU5 285 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 ZNF814B7Z6K7 855 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 WDR1O75083 606 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 ZNF16P17020 682 aaPredicted RBP8.51□□□□□ -1.05
CLDN2-202ENST00000540876 ZNF43P17038 809 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 CSNK2A2P19784 350 aaPredicted RBP8.51□□□□□ -1.05
CLDN2-202ENST00000540876 TNFSF4P23510 183 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 OMGP23515 440 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 HSD11B1P28845 292 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 DNASE1L1P49184 302 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 RAB28P51157 221 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 CCR5P51681 352 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 RUNX2Q13950 521 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 VWA1Q6PCB0 445 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 ERN2Q76MJ5 926 aaKnown RBP8.51□□□□□ -1.05
CLDN2-202ENST00000540876 RNF44Q7L0R7 432 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 OR4D5Q8NGN0 318 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 OR5H2Q8NGV7 314 aa8.51□□□□□ -1.05
CLDN2-202ENST00000540876 KTI12Q96EK9 354 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms