RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 LINC01560Q8TB33 94 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 SYT3Q9BQG1 590 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 PECRQ9BY49 303 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 DPAGT1Q9H3H5 408 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 MSL2Q9HCI7 577 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 HSF4Q9ULV5 492 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 ST3GAL6Q9Y274 331 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 KCNK7Q9Y2U2 307 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 ATP23Q9Y6H3 246 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 HIVEP1P15822 2718 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 F5H5P2 479 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 C19orf84I3L1E1 186 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 ACAA1P09110 424 aaPredicted RBP12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 SPNP16150 400 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 HLA-DMAP28067 261 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 FAUP35544 74 aaKnown RBP12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 MAB21L1Q13394 359 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 TAF9Q16594 264 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 PCGF3Q3KNV8 242 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 PIGYQ3MUY2 71 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 SIGIRRQ6IA17 410 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 LINC00596Q86U02 117 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 DMRTC2Q8IXT2 367 aaPredicted RBP12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 Q8IYB0 196 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 ST8SIA4Q92187 359 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 PLPPR2Q96GM1 343 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 TAAR3PQ9P1P4 343 aa12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 ELF5Q9UKW6 265 aaPredicted RBP12.08□□□□□ -0.47
CYB561A3-216ENST00000540755 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 PLSCR5A0PG75 271 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 TUBAL3A6NHL2 446 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 ZSCAN5BA6NJL1 495 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 VSTM5A8MXK1 200 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 SHISA9B4DS77 424 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 GEMIN2O14893 280 aaKnown RBP12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 RHBDL1O75783 438 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 PTBP3O95758 552 aaKnown RBP12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 CD3EP07766 207 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 CHATP28329 748 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 GNG2P59768 71 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 IL13RA2Q14627 380 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 MPV17LQ2QL34 196 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 BEX5Q5H9J7 111 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 OLFML2AQ68BL7 652 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 ADAM5Q6NVV9 412 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 TRAPPC6BQ86SZ2 158 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 CELF2-AS1Q8N7Q2 184 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 NEDD4LQ96PU5 975 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 HRASLSQ9HDD0 168 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 NUBP2Q9Y5Y2 271 aa12.08□□□□□ -0.48
CYB561A3-216ENST00000540755 MTORP42345 2549 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 AKAP9Q99996 3911 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 MEIS3P1A6NDR6 274 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 F8VVB4 439 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 F8VWA3 439 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 H3BUI4 141 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 CDIPTO14735 213 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 TPD52L2O43399 206 aaKnown RBP12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 SSX5O60225 188 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 NOS1APO75052 506 aaPredicted RBP12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 PDCD6O75340 191 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 DHFRP00374 187 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 GRPP07492 148 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 PGA5P0DJD9 388 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 BTCP35070 178 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 RCVRNP35243 200 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 CBX5P45973 191 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 TAS2R19P59542 299 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 ERVK11-1P61568 191 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 SNTB1Q13884 538 aaKnown RBP12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 DAZAP2Q15038 168 aaPredicted RBP12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 ADIPOQQ15848 244 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 RTN4RL2Q86UN3 420 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 C11orf53Q8IXP5 236 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 ZNF295-AS1Q8N0V1 137 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 FAM58AQ8N1B3 248 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 TMEM229BQ8NBD8 167 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 OR2Z1Q8NG97 314 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 NUDCD2Q8WVJ2 157 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 ELMOD3Q96FG2 381 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 NRIP2Q9BQI9 281 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 PLEKHJ1Q9NW61 149 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 POU2F3Q9UKI9 436 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 ANAPC10Q9UM13 185 aa12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 CHD3Q12873 2000 aaKnown RBP12.07□□□□□ -0.48
CYB561A3-216ENST00000540755 HMX3A6NHT5 357 aa12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 PRKACAP17612 351 aa12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 PMELP40967 661 aa12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 PLA1AQ53H76 456 aa12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 NKAPLQ5M9Q1 402 aa12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 C6orf201Q7Z4U5 140 aa12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 AKAP14Q86UN6 197 aa12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 BATF2Q8N1L9 274 aa12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 POC1AQ8NBT0 407 aa12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 GTF3AQ92664 365 aaKnown RBP12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 EMG1Q92979 244 aaKnown RBP12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 ZNF488Q96MN9 340 aa12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 NPDC1Q9NQX5 325 aaPredicted RBP12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 NLKQ9UBE8 527 aa12.06□□□□□ -0.48
CYB561A3-216ENST00000540755 PLCE1Q9P212 2302 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms