RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 LSMEM1Q8N8F7 131 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 PRELID1Q9Y255 219 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 F5P12259 2224 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 PPIAL4EA0A075B759 164 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 OOEPA6NGQ2 149 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 PPIAL4DF5H284 164 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 TSPAN2O60636 221 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 PPIAL4FP0DN26 164 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 COL10A1Q03692 680 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 MS4A3Q96HJ5 214 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 DHRS9Q9BPW9 319 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 PECRQ9BY49 303 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 PPIAL4AQ9Y536 164 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 MYOFQ9NZM1 2061 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 GEMIN2O14893 280 aaKnown RBP4.71□□□□□ -1.66
LRP6-203ENST00000538239 NUPL2O15504 423 aaKnown RBP4.71□□□□□ -1.66
LRP6-203ENST00000538239 SNAPINO95295 136 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 S100A11P31949 105 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 ATP5J2P56134 94 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 PRR27Q6MZM9 219 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 DEGS2Q6QHC5 323 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 ACOT7LQ6ZUV0 252 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 LRRTM1Q86UE6 522 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 SLC7A5P1Q8MH63 180 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 PXT1Q8NFP0 134 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 YIPF5Q969M3 257 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 ABHD17AQ96GS6 310 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 PLSCR3Q9NRY6 295 aa4.71□□□□□ -1.66
LRP6-203ENST00000538239 IGKV3-7A0A075B6H7 116 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 HAX1O00165 279 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 TXNL1O43396 289 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 PDCD6O75340 191 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 H2AFB1P0C5Y9 115 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 RPL12P30050 165 aaKnown RBP4.7□□□□□ -1.66
LRP6-203ENST00000538239 RPS10P46783 165 aaKnown RBP4.7□□□□□ -1.66
LRP6-203ENST00000538239 EVX1P49640 407 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 MRPS11P82912 194 aaKnown RBP4.7□□□□□ -1.66
LRP6-203ENST00000538239 TMEM123Q8N131 208 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 TVP23CQ96ET8 276 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 TMEM147Q9BVK8 224 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 DUSP21Q9H596 190 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 HEXA-AS1Q9H8Q6 139 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 DOK5Q9P104 306 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 NPTNQ9Y639 398 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 A0A1W2PPE3 182 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 RFPL4AA6NLU0 287 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 RFPL4AL1F8VTS6 287 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 FFAR1O14842 300 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 C1QCP02747 245 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 IL5P05113 134 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 FGF2P09038 288 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 RHOBP62745 196 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 LY6DQ14210 128 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 ECSCRQ19T08 205 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 NSUN5P2Q63ZY6 315 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 ZNF764Q96H86 408 aaPredicted RBP4.7□□□□□ -1.66
LRP6-203ENST00000538239 TRAV39A0A0B4J263 110 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 ZNF724A8MTY0 619 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 C4orf51C9J302 202 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 E5RGE8 158 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 PLPP2O43688 288 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 SMPD2O60906 423 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 PDGFAP04085 211 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 REG1BP48304 166 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 RPL7L1Q6DKI1 246 aaKnown RBP4.7□□□□□ -1.66
LRP6-203ENST00000538239 C2orf50Q96LR7 162 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 ZNF488Q96MN9 340 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 HSD17B10Q99714 261 aaKnown RBP4.7□□□□□ -1.66
LRP6-203ENST00000538239 NAGKQ9UJ70 344 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 NSG2Q9Y328 171 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 CCL27Q9Y4X3 112 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 TAGLN2P37802 199 aaKnown RBP4.7□□□□□ -1.66
LRP6-203ENST00000538239 UCP2P55851 309 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 AESQ08117 197 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 PIGYQ3MUY2 71 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 CD276Q5ZPR3 534 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 SSX7Q7RTT5 188 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 DYRK2Q92630 601 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 WNT2BQ93097 391 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 VWCEQ96DN2 955 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 SIGLEC12Q96PQ1 595 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 BATFQ16520 125 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 NECAP1Q8NC96 275 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 OR2V2Q96R30 315 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 CCL13Q99616 98 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 TMEM208Q9BTX3 173 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 SRXN1Q9BYN0 137 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 SEBOXQ9HB31 216 aaPredicted RBP4.7□□□□□ -1.66
LRP6-203ENST00000538239 SLC35D1Q9NTN3 355 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 FRRS1LQ9P0K9 344 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 HILPDAQ9Y5L2 63 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 INSIG2Q9Y5U4 225 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 C3orf85A0A1B0GTC6 90 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 OR5H14A6NHG9 310 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 OR5H1A6NKK0 313 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 ZNF883P0CG24 379 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 ERGP11308 486 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 PMELP40967 661 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 LYZP61626 148 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 PLAC9Q5JTB6 97 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms