RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 CCL1P22362 96 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 ACP1P24666 158 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 CFPP27918 469 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 HOXA6P31267 233 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 IDH3GP51553 393 aaPredicted RBP7.54□□□□□ -1.2
UBE3B-208ENST00000538070 HOXA4Q00056 320 aaPredicted RBP7.54□□□□□ -1.2
UBE3B-208ENST00000538070 FOXO1Q12778 655 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 PDZK1IP1Q13113 114 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 PRDX4Q13162 271 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 ACTBL2Q562R1 376 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 OVCH2Q7RTZ1 564 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 BVESQ8NE79 360 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 LRRC46Q96FV0 321 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 Q96M66 194 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 TSNAXQ99598 290 aaKnown RBP7.54□□□□□ -1.2
UBE3B-208ENST00000538070 DHRS9Q9BPW9 319 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 SF3B5Q9BWJ5 86 aaKnown RBP7.54□□□□□ -1.2
UBE3B-208ENST00000538070 LIME1Q9H400 295 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 BCO1Q9HAY6 547 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 SLC2A8Q9NY64 477 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 FZR1Q9UM11 496 aa7.54□□□□□ -1.2
UBE3B-208ENST00000538070 APC2O95996 2303 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 C19orf67A6NJJ6 358 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 LRP3O75074 770 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 TPT1P13693 172 aaKnown RBP7.53□□□□□ -1.2
UBE3B-208ENST00000538070 CA6P23280 308 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 GGNBP1Q5YKI7 109 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 SLX1AQ9BQ83 275 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 RNF126Q9BV68 326 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 REG4Q9BYZ8 158 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 SH2D2AQ9NP31 389 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF816-ZNF321PA0A0X1KG74 233 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 NKX2-8O15522 239 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 SYNGR1O43759 233 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 LILRA1O75019 489 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 MED6O75586 246 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 LYZL6O75951 148 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 PRH1P02810 166 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 TBPP20226 339 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 CRYGSP22914 178 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 GNRHRP30968 328 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 CYCSP99999 105 aaKnown RBP7.53□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF616Q08AN1 781 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 PAN3Q58A45 887 aaKnown RBP7.53□□□□□ -1.2
UBE3B-208ENST00000538070 CRIP3Q6Q6R5 217 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 BAP18Q8IXM2 172 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 HSD17B11Q8NBQ5 300 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 NECAP2Q9NVZ3 263 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 UBE2J1Q9Y385 318 aaPredicted RBP7.53□□□□□ -1.2
UBE3B-208ENST00000538070 ADAMTS20P59510 1910 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 GTF3C1Q12789 2109 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 FIGNL2A6NMB9 653 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 F8W036 122 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 K7EPK0 472 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 CD8AP01732 235 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 FCGR3AP08637 254 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 CAV2P51636 162 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 BLOC1S1P78537 153 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 RBM39Q14498 530 aaKnown RBP7.53□□□□□ -1.2
UBE3B-208ENST00000538070 CLINT1Q14677 625 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF169Q14929 603 aaPredicted RBP7.53□□□□□ -1.2
UBE3B-208ENST00000538070 SLC10A1Q14973 349 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 PLEKHN1Q494U1 663 aaPredicted RBP7.53□□□□□ -1.2
UBE3B-208ENST00000538070 VAX1Q5SQQ9 334 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 LHFPL2Q6ZUX7 228 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 FAM71E2Q8N5Q1 922 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF565Q8N9K5 539 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 DEFB124Q8NES8 71 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 EXTL1Q92935 676 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 SPSB1Q96BD6 273 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 C2orf50Q96LR7 162 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 ZNF286AQ9HBT8 521 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 C1orf123Q9NWV4 160 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 OR14J1Q9UGF5 321 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 NUP50Q9UKX7 468 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 OSGIN2Q9Y236 505 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 MEMO1Q9Y316 297 aa7.53□□□□□ -1.2
UBE3B-208ENST00000538070 HEATR1Q9H583 2144 aaKnown RBP7.52□□□□□ -1.21
UBE3B-208ENST00000538070 TRAPPC2LH3BP13 241 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 WISP2O76076 250 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 IL2RAP01589 272 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 GRPP07492 148 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 CD59P13987 128 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 AADACP22760 399 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 FUT6P51993 359 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 ZNF133P52736 654 aaPredicted RBP7.52□□□□□ -1.21
UBE3B-208ENST00000538070 SRSF3P84103 164 aaKnown RBP7.52□□□□□ -1.21
UBE3B-208ENST00000538070 SMUG1Q53HV7 270 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 ZNF552Q9H707 407 aaPredicted RBP7.52□□□□□ -1.21
UBE3B-208ENST00000538070 ZNF703Q9H7S9 590 aaPredicted RBP7.52□□□□□ -1.21
UBE3B-208ENST00000538070 RASL12Q9NYN1 266 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 B8ZZF3 427 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 GPR31O00270 319 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 SHOXO15266 292 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 HSPA12AO43301 675 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 CNOT4O95628 575 aaKnown RBP7.52□□□□□ -1.21
UBE3B-208ENST00000538070 APLNRP35414 380 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 AKR1C3P42330 323 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 PPA1Q15181 289 aa7.52□□□□□ -1.21
UBE3B-208ENST00000538070 NSUN5P2Q63ZY6 315 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms