RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 GAPDHP04406 335 aaKnown RBP12.24□□□□□ -0.45
LIG1-203ENST00000536218 CELA2AP08217 269 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 GLIPR1P48060 266 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 SLC25A1P53007 311 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 FOXK1P85037 733 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 PLXDC2Q6UX71 529 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 HOGA1Q86XE5 327 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 OR10G3Q8NGC4 313 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 RFNGQ9Y644 331 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 KIF26BQ2KJY2 2108 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 IGLV3-12A0A075B6K2 115 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 XKRY2A2RUG3 117 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 HSD17B6O14756 317 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 SELEP16581 610 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 GAGE1Q13065 139 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 PMS2P11Q13670 270 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 HIKESHIQ53FT3 197 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 NAT6Q93015 286 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 METTL7AQ9H8H3 244 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 GAB2Q9UQC2 676 aa12.24□□□□□ -0.45
LIG1-203ENST00000536218 FREM3P0C091 2139 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 WIPF3A6NGB9 483 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 FTCDNL1E5RQL4 147 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 IFNL4K9M1U5 179 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 TP53I11O14683 189 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 MPZL1O95297 269 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 C17orf67Q0P5P2 114 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 RNF151Q2KHN1 245 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 ZNF260Q3ZCT1 412 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 TMEM156Q8N614 296 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 OR1P1Q8NH06 330 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 DEFB126Q9BYW3 111 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 FREM2Q5SZK8 3169 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 AHCTF1Q8WYP5 2266 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 SDCBPO00560 298 aaPredicted RBP12.23□□□□□ -0.45
LIG1-203ENST00000536218 XRCC2O43543 280 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 CRYABP02511 175 aaKnown RBP12.23□□□□□ -0.45
LIG1-203ENST00000536218 IRF2P14316 349 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 TFPI2P48307 235 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 RPL27P61353 136 aaKnown RBP12.23□□□□□ -0.45
LIG1-203ENST00000536218 RND3P61587 244 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 SUPT4H1P63272 117 aaKnown RBP12.23□□□□□ -0.45
LIG1-203ENST00000536218 SGCBQ16585 318 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 PRAMEF20Q5VT98 475 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 FAM166AQ6J272 317 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 OR4D6Q8NGJ1 314 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 RNASE8Q8TDE3 154 aaKnown RBP12.23□□□□□ -0.45
LIG1-203ENST00000536218 AQP3Q92482 292 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 C5orf34Q96MH7 638 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 ZNF107Q9UII5 783 aaPredicted RBP12.23□□□□□ -0.45
LIG1-203ENST00000536218 B9D1Q9UPM9 204 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 RALGAPA1Q6GYQ0 2036 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 TECTAO75443 2155 aa12.23□□□□□ -0.45
LIG1-203ENST00000536218 GCGP01275 180 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 CTLA4P16410 223 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 FOXF1Q12946 379 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 WDR5BQ86VZ2 330 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 OIT3Q8WWZ8 545 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 TMEM234Q8WY98 164 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 C22orf15Q8WYQ4 148 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 URM1Q9BTM9 101 aaKnown RBP12.22□□□□□ -0.45
LIG1-203ENST00000536218 ABHD14AQ9BUJ0 271 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 WFDC1Q9HC57 220 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 GPR173Q9NS66 373 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 MED29Q9NX70 200 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 PRSS37A4D1T9 235 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 A6NIZ1 184 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 PLPP3O14495 311 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 SEC11BP0C7V7 166 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 UCP2P55851 309 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 RAP1BP61224 184 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 H3F3AP84243 136 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 MAJINQ3KP22 176 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 C1orf210Q8IVY1 113 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 MAML2Q8IZL2 1156 aaPredicted RBP12.22□□□□□ -0.45
LIG1-203ENST00000536218 ZFP62Q8NB50 900 aaPredicted RBP12.22□□□□□ -0.45
LIG1-203ENST00000536218 OR4X1Q8NH49 305 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 EMC6Q9BV81 110 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 V9GYS6 101 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 A0A087WWC5 75 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 CCDC163A0A0D9SF12 145 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 ZNF705FA8MVS1 300 aaPredicted RBP12.22□□□□□ -0.45
LIG1-203ENST00000536218 NPIPB7O75200 414 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 ZFAND5O76080 213 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 ZNF705DP0CH99 300 aaPredicted RBP12.22□□□□□ -0.45
LIG1-203ENST00000536218 ZNF705BP0CI00 300 aaPredicted RBP12.22□□□□□ -0.45
LIG1-203ENST00000536218 FMODQ06828 376 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 IQCJQ1A5X6 159 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 CLEC12BQ2HXU8 276 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 EMC4Q5J8M3 183 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 CDC20BQ86Y33 519 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 SYT3Q9BQG1 590 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 CABLES2Q9BTV7 478 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 LPAR2Q9HBW0 351 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 DNAJC4Q9NNZ3 241 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 GPR132Q9UNW8 380 aa12.22□□□□□ -0.45
LIG1-203ENST00000536218 PNPP00491 289 aa12.21□□□□□ -0.45
LIG1-203ENST00000536218 MT-ATP6P00846 226 aa12.21□□□□□ -0.45
LIG1-203ENST00000536218 TBPP20226 339 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms