RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 GRK1Q15835 563 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 FAM189A2Q15884 450 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 PLA1AQ53H76 456 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 CRIP3Q6Q6R5 217 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 UTS2BQ765I0 119 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 FAM58AQ8N1B3 248 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 PIFOQ8TCI5 191 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 FGGYQ96C11 551 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 MALSU1Q96EH3 234 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 NKX3-1Q99801 234 aaPredicted RBP13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 SEBOXQ9HB31 216 aaPredicted RBP13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 RBFOX1Q9NWB1 397 aaKnown RBP13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 FRRS1LQ9P0K9 344 aa13.11□□□□□ -0.31
CLSTN3-204ENST00000535313 IGKV1-9A0A0C4DH69 117 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 ODF3BA8MYP8 253 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 BCL3P20749 454 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 AZGP1P25311 298 aaKnown RBP13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 NPBWR2P48146 333 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 ALDH3A2P51648 485 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 OR12D2P58182 307 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 ZNF91Q05481 1191 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 SSX2Q16385 188 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 ZIK1Q3SY52 487 aaPredicted RBP13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 ZNF626Q68DY1 528 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 ZFP1Q6P2D0 407 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 FDX2Q6P4F2 183 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 LHFPL2Q6ZUX7 228 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 OR11H6Q8NGC7 330 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 RPS4Y2Q8TD47 263 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 RNF166Q96A37 237 aaPredicted RBP13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 SPSB1Q96BD6 273 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 MRPL48Q96GC5 212 aaKnown RBP13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 MYCBPQ99417 103 aaPredicted RBP13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 CDCA4Q9BXL8 241 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 CHST6Q9GZX3 395 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 IL36RNQ9UBH0 155 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 HHLA2Q9UM44 414 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 LINC00312Q9Y6C7 94 aa13.1□□□□□ -0.31
CLSTN3-204ENST00000535313 J3QLW9 94 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 J3QRE1 110 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 CHST1O43916 411 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 IGHA1P01876 353 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 ZNF19P17023 458 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 PRKACAP17612 351 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 DUSP1P28562 367 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 CCR9P51686 369 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 NANOS3P60323 173 aaKnown RBP13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 ACTA2P62736 377 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 ACTG2P63267 376 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 PDZK1IP1Q13113 114 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 ZNF146Q15072 292 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 SPIN3Q5JUX0 258 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 TET2Q6N021 2002 aaPredicted RBP13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 TCF23Q7RTU1 214 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 DYNAPQ8N1N2 210 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 ACBD7Q8N6N7 88 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 KLHDC1Q8N7A1 406 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 ZNF676Q8N7Q3 588 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 OPALINQ96PE5 141 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 MBOAT4Q96T53 435 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 NEK6Q9HC98 313 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 PITPNC1Q9UKF7 332 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 FOXJ3Q9UPW0 622 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 TCF19Q9Y242 345 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 SESN1Q9Y6P5 492 aa13.09□□□□□ -0.31
CLSTN3-204ENST00000535313 MGST3O14880 152 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 PSPNO60542 156 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 VSIG10L2P0DP72 767 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 CALCBP10092 127 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 RAB13P51153 203 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 SNU13P55769 128 aaKnown RBP13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 ZBTB49Q6ZSB9 765 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 TRAPPC6BQ86SZ2 158 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 C10orf67Q8IYJ2 551 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 CBR4Q8N4T8 237 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 TPRX1Q8N7U7 411 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 C11orf44Q8N8P7 122 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 OR52N4Q8NGI2 321 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 OR13C3Q8NGS6 347 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 C4orf36Q96KX1 117 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 PCDHGB5Q9Y5G0 923 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 GMPPBQ9Y5P6 360 aa13.08□□□□□ -0.32
CLSTN3-204ENST00000535313 SH2D1BO14796 132 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 MINOS1Q5TGZ0 78 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 OR4S1Q8NGB4 309 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 NDNFQ8TB73 568 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 CFHR4Q92496 578 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 RFT1Q96AA3 541 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 LGALS12Q96DT0 336 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 PELI1Q96FA3 418 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 ALG8Q9BVK2 526 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 S100A14Q9HCY8 104 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 HMG20AQ9NP66 347 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 EXOSC4Q9NPD3 245 aaKnown RBP13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 EXOGQ9Y2C4 368 aaKnown RBP13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 GSTK1Q9Y2Q3 226 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 UBE2J1Q9Y385 318 aaPredicted RBP13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 MINOS1-NBL1R4GNA1 71 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 DSCAML1Q8TD84 2053 aa13.07□□□□□ -0.32
CLSTN3-204ENST00000535313 IGHV2-26A0A0B4J1V2 119 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms