RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 DUX4L6P0CJ89 424 aa8.47□□□□□ -1.05
CSDE1-217ENST00000534699 DUX4L7P0CJ90 424 aa8.47□□□□□ -1.05
CSDE1-217ENST00000534699 COL10A1Q03692 680 aa8.47□□□□□ -1.05
CSDE1-217ENST00000534699 TTC23Q5W5X9 447 aa8.47□□□□□ -1.05
CSDE1-217ENST00000534699 DUX4L9Q6RFH8 374 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-217ENST00000534699 Q6ZSV7 163 aa8.47□□□□□ -1.05
CSDE1-217ENST00000534699 PQLC1Q8N2U9 271 aa8.47□□□□□ -1.05
CSDE1-217ENST00000534699 EMG1Q92979 244 aaKnown RBP8.47□□□□□ -1.05
CSDE1-217ENST00000534699 RNF166Q96A37 237 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-217ENST00000534699 ZNF714Q96N38 554 aa8.47□□□□□ -1.05
CSDE1-217ENST00000534699 SEMA6AQ9H2E6 1030 aa8.47□□□□□ -1.05
CSDE1-217ENST00000534699 SIRT7Q9NRC8 400 aa8.47□□□□□ -1.05
CSDE1-217ENST00000534699 C19orf12Q9NSK7 152 aa8.47□□□□□ -1.05
CSDE1-217ENST00000534699 MTCH1Q9NZJ7 389 aa8.47□□□□□ -1.05
CSDE1-217ENST00000534699 FRRS1LQ9P0K9 344 aa8.47□□□□□ -1.05
CSDE1-217ENST00000534699 DUX4Q9UBX2 424 aa8.47□□□□□ -1.05
CSDE1-217ENST00000534699 FAM230AA0A1W2PPH8 454 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 GPX5O75715 221 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 DCKP27707 260 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 KPNB1Q14974 876 aaKnown RBP8.46□□□□□ -1.06
CSDE1-217ENST00000534699 TAF9Q16594 264 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 C2orf68Q2NKX9 166 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 ASCL4Q6XD76 172 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 TMPRSS11AQ6ZMR5 421 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 BCDIN3DQ7Z5W3 292 aaKnown RBP8.46□□□□□ -1.06
CSDE1-217ENST00000534699 LGALS12Q96DT0 336 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 IFT22Q9H7X7 185 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 RAB9BQ9NP90 201 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 EXOSC4Q9NPD3 245 aaKnown RBP8.46□□□□□ -1.06
CSDE1-217ENST00000534699 IL36GQ9NZH8 169 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 EXOSC1Q9Y3B2 195 aaKnown RBP8.46□□□□□ -1.06
CSDE1-217ENST00000534699 A0A087X0M5 115 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 LOC100130705A0A1B0GUX0 176 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 A0A1B0GX30 115 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 ERICH4A6NGS2 130 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 MTCP1P56278 107 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 Q3ZCU0 254 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 NHLRC3Q5JS37 347 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 ZNF529Q6P280 563 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 RPL22L1Q6P5R6 122 aaKnown RBP8.46□□□□□ -1.06
CSDE1-217ENST00000534699 BRICD5Q6PL45 260 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 ZNF596Q8TC21 504 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 PYDC1Q8WXC3 89 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 PPP1R14AQ96A00 147 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 SEH1LQ96EE3 360 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 ALG8Q9BVK2 526 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 ABCB10Q9NRK6 738 aa8.46□□□□□ -1.06
CSDE1-217ENST00000534699 ZNF729A6NN14 1252 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-217ENST00000534699 ANGPTL7O43827 346 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 IGHV1-8P0DP01 117 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 TP53I3Q53FA7 332 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 SLC25A26Q70HW3 274 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 CBR4Q8N4T8 237 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 OR13C3Q8NGS6 347 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 PELI1Q96FA3 418 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 SSX3Q99909 188 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 LINC00574Q9H8X3 128 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 FAM118AQ9NWS6 357 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 PAK1IP1Q9NWT1 392 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-217ENST00000534699 ERVK13-1Q9NX77 482 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 OR6C3Q9NZP0 311 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 MAGEB3O15480 346 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 SULT1B1O43704 296 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 CD2P06729 351 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 SELLP14151 372 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 POLR2IP36954 125 aaKnown RBP8.45□□□□□ -1.06
CSDE1-217ENST00000534699 CEACAM3P40198 252 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 P2RX3P56373 397 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 TAS2R43P59537 309 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 RELBQ01201 579 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 ZNF676Q8N7Q3 588 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 OR5AK2Q8NH90 309 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 TBX5Q99593 518 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 CLEC7AQ9BXN2 247 aa8.45□□□□□ -1.06
CSDE1-217ENST00000534699 TRGV10A0A0A0MS01 117 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 OCM2P0CE71 109 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 OCMP0CE72 109 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-217ENST00000534699 PIPP12273 146 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-217ENST00000534699 RBMXP38159 391 aaKnown RBP8.44□□□□□ -1.06
CSDE1-217ENST00000534699 GPR176Q14439 515 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 OR51T1Q8NGJ9 327 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 OR52N1Q8NH53 320 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 OR2T6Q8NHC8 308 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 FGGYQ96C11 551 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 ADAT3Q96EY9 351 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-217ENST00000534699 AKR1E2Q96JD6 320 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 DUX5Q96PT3 197 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 TCF7L1Q9HCS4 588 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 SMPD3Q9NY59 655 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-217ENST00000534699 TCF19Q9Y242 345 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 SOX21Q9Y651 276 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-217ENST00000534699 IGKV1-27A0A075B6S5 117 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 A6NDX4 124 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 OGG1O15527 345 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 ZNF780AO75290 641 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-217ENST00000534699 APOL3O95236 402 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 GABRA5P31644 462 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 EFNB2P52799 333 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 OR12D2P58182 307 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 BDH1Q02338 343 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms