RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 POU3F4P49335 361 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 NANOS3P60323 173 aaKnown RBP7.2□□□□□ -1.26
COPB1-211ENST00000534234 SNRPGP62308 76 aaKnown RBP7.2□□□□□ -1.26
COPB1-211ENST00000534234 ACTC1P68032 377 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 ACTA1P68133 377 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 DYNC1I2Q13409 638 aaKnown RBP7.2□□□□□ -1.26
COPB1-211ENST00000534234 GRK1Q15835 563 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 SSX2Q16385 188 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 ZIK1Q3SY52 487 aaPredicted RBP7.2□□□□□ -1.26
COPB1-211ENST00000534234 SLC25A30Q5SVS4 291 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 LDLRAD2Q5SZI1 272 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 MEDAGQ5VYS4 303 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 ZNF626Q68DY1 528 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 FDX2Q6P4F2 183 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 LIAT1Q6ZQX7 453 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 UTS2BQ765I0 119 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 FAM58AQ8N1B3 248 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 ACBD7Q8N6N7 88 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 TPRX1Q8N7U7 411 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 CDCA4Q9BXL8 241 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 CHST6Q9GZX3 395 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 RANBP3Q9H6Z4 567 aaPredicted RBP7.2□□□□□ -1.26
COPB1-211ENST00000534234 ABCB10Q9NRK6 738 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 RBFOX1Q9NWB1 397 aaKnown RBP7.2□□□□□ -1.26
COPB1-211ENST00000534234 GLS2Q9UI32 602 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 TBL2Q9Y4P3 447 aaKnown RBP7.2□□□□□ -1.26
COPB1-211ENST00000534234 TRBV2A0A0J9YWF9 115 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 SNTNA6NMZ2 147 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 J3QLW9 94 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 EI24O14681 340 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 SLC16A6O15403 523 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 PSPNO60542 156 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 HTR1AP08908 422 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 OCM2P0CE71 109 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 OCMP0CE72 109 aaPredicted RBP7.2□□□□□ -1.26
COPB1-211ENST00000534234 VSIG10L2P0DP72 767 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 ZNF19P17023 458 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 PRKACAP17612 351 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 AZGP1P25311 298 aaKnown RBP7.2□□□□□ -1.26
COPB1-211ENST00000534234 CCR9P51686 369 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 SNU13P55769 128 aaKnown RBP7.2□□□□□ -1.26
COPB1-211ENST00000534234 ACTA2P62736 377 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 ACTG2P63267 376 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 ZNF91Q05481 1191 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 PDZK1IP1Q13113 114 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 ZNF146Q15072 292 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 HIST2H2BDQ6DRA6 164 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 CCBE1Q6UXH8 406 aaPredicted RBP7.2□□□□□ -1.26
COPB1-211ENST00000534234 LHFPL2Q6ZUX7 228 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 TCF23Q7RTU1 214 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 KLHDC1Q8N7A1 406 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 ZNF676Q8N7Q3 588 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 OR4S1Q8NGB4 309 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 RPS4Y2Q8TD47 263 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 CFHR4Q92496 578 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 SPSB1Q96BD6 273 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 FOXRED1Q96CU9 486 aaPredicted RBP7.2□□□□□ -1.26
COPB1-211ENST00000534234 MBOAT4Q96T53 435 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 AASSQ9UDR5 926 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 PITPNC1Q9UKF7 332 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 HHLA2Q9UM44 414 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 TCF19Q9Y242 345 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 LINC00312Q9Y6C7 94 aa7.2□□□□□ -1.26
COPB1-211ENST00000534234 VWFP04275 2813 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 A6NDX4 124 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 H3BNX3 289 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 SIRPB1O00241 398 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 SH2D1BO14796 132 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 MGST3O14880 152 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 ERP29P30040 261 aaKnown RBP7.19□□□□□ -1.26
COPB1-211ENST00000534234 ALDH3A2P51648 485 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 KPNB1Q14974 876 aaKnown RBP7.19□□□□□ -1.26
COPB1-211ENST00000534234 SPIN3Q5JUX0 258 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 TRAPPC6BQ86SZ2 158 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 LHFPL3Q86UP9 236 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 TMEM219Q86XT9 240 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 C1QL4Q86Z23 238 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 CBR4Q8N4T8 237 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 OR51A4Q8NGJ6 313 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 OR10AC1Q8NH08 325 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 RFT1Q96AA3 541 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 PELI1Q96FA3 418 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 OPALINQ96PE5 141 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 HMG20AQ9NP66 347 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 EXOGQ9Y2C4 368 aaKnown RBP7.19□□□□□ -1.26
COPB1-211ENST00000534234 GSTK1Q9Y2Q3 226 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 HILPDAQ9Y5L2 63 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 GMPPBQ9Y5P6 360 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 SESN1Q9Y6P5 492 aa7.19□□□□□ -1.26
COPB1-211ENST00000534234 IGHV2-26A0A0B4J1V2 119 aa7.18□□□□□ -1.26
COPB1-211ENST00000534234 IGKV1-12A0A0C4DH73 117 aa7.18□□□□□ -1.26
COPB1-211ENST00000534234 OR4C45A6NMZ5 311 aa7.18□□□□□ -1.26
COPB1-211ENST00000534234 E9PQ18 207 aa7.18□□□□□ -1.26
COPB1-211ENST00000534234 OR2H2O95918 312 aa7.18□□□□□ -1.26
COPB1-211ENST00000534234 IGKV1D-12P01611 117 aa7.18□□□□□ -1.26
COPB1-211ENST00000534234 JUNBP17275 347 aaPredicted RBP7.18□□□□□ -1.26
COPB1-211ENST00000534234 OR3A1P47881 315 aa7.18□□□□□ -1.26
COPB1-211ENST00000534234 DYNLT3P51808 116 aa7.18□□□□□ -1.26
COPB1-211ENST00000534234 P2RX3P56373 397 aa7.18□□□□□ -1.26
COPB1-211ENST00000534234 SLC34A1Q06495 639 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms