RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 RNFT2Q96EX2 444 aa9.79□□□□□ -0.84
SORL1-208ENST00000529445 ADAT3Q96EY9 351 aaPredicted RBP9.79□□□□□ -0.84
SORL1-208ENST00000529445 HRASLS5Q96KN8 279 aa9.79□□□□□ -0.84
SORL1-208ENST00000529445 MYCBPQ99417 103 aaPredicted RBP9.79□□□□□ -0.84
SORL1-208ENST00000529445 CDCA4Q9BXL8 241 aa9.79□□□□□ -0.84
SORL1-208ENST00000529445 RBFOX1Q9NWB1 397 aaKnown RBP9.79□□□□□ -0.84
SORL1-208ENST00000529445 GLS2Q9UI32 602 aa9.79□□□□□ -0.84
SORL1-208ENST00000529445 PITPNC1Q9UKF7 332 aa9.79□□□□□ -0.84
SORL1-208ENST00000529445 TCF19Q9Y242 345 aa9.79□□□□□ -0.84
SORL1-208ENST00000529445 LINC00312Q9Y6C7 94 aa9.79□□□□□ -0.84
SORL1-208ENST00000529445 KIAA2026Q5HYC2 2103 aa9.79□□□□□ -0.84
SORL1-208ENST00000529445 NOTCH3Q9UM47 2321 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 DAPL1A0PJW8 107 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 MEX3AA1L020 520 aaKnown RBP9.78□□□□□ -0.84
SORL1-208ENST00000529445 J3QRE1 110 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 EI24O14681 340 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 IGHA1P01876 353 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 HTR1AP08908 422 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 PRKACAP17612 351 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 ATF1P18846 271 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 BCL3P20749 454 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 AZGP1P25311 298 aaKnown RBP9.78□□□□□ -0.84
SORL1-208ENST00000529445 OR12D2P58182 307 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 SNRPGP62308 76 aaKnown RBP9.78□□□□□ -0.84
SORL1-208ENST00000529445 ACTA2P62736 377 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 ACTG2P63267 376 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 DYNC1I2Q13409 638 aaKnown RBP9.78□□□□□ -0.84
SORL1-208ENST00000529445 ZNF146Q15072 292 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 FAM189A2Q15884 450 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 PLA1AQ53H76 456 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 SPIN3Q5JUX0 258 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 SLC25A30Q5SVS4 291 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 ZFP1Q6P2D0 407 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 FDX2Q6P4F2 183 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 FAM58AQ8N1B3 248 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 ACBD7Q8N6N7 88 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 PIFOQ8TCI5 191 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 RNF166Q96A37 237 aaPredicted RBP9.78□□□□□ -0.84
SORL1-208ENST00000529445 FGGYQ96C11 551 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 MRPL48Q96GC5 212 aaKnown RBP9.78□□□□□ -0.84
SORL1-208ENST00000529445 OPALINQ96PE5 141 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 MBOAT4Q96T53 435 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 NKX3-1Q99801 234 aaPredicted RBP9.78□□□□□ -0.84
SORL1-208ENST00000529445 CHST6Q9GZX3 395 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 FRRS1LQ9P0K9 344 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 IL36RNQ9UBH0 155 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 HHLA2Q9UM44 414 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 SESN1Q9Y6P5 492 aa9.78□□□□□ -0.84
SORL1-208ENST00000529445 PLXNB1O43157 2135 aa9.77□□□□□ -0.84
SORL1-208ENST00000529445 IGKV1-9A0A0C4DH69 117 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 F2RL2O00254 374 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 MGST3O14880 152 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 NPBWR2P48146 333 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 ALDH3A2P51648 485 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 CCR9P51686 369 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 DYNLT3P51808 116 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 P2RX3P56373 397 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 NANOS3P60323 173 aaKnown RBP9.77□□□□□ -0.85
SORL1-208ENST00000529445 SSX2Q16385 188 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 MINOS1Q5TGZ0 78 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 ZBTB49Q6ZSB9 765 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 TRAPPC6BQ86SZ2 158 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 DYNAPQ8N1N2 210 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 ZNF676Q8N7Q3 588 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 OR13C3Q8NGS6 347 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 CFHR4Q92496 578 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 ZNF702PQ9H963 129 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 NEK6Q9HC98 313 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 FOXJ3Q9UPW0 622 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 PCDHGB5Q9Y5G0 923 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 MINOS1-NBL1R4GNA1 71 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 DNAH3Q8TD57 4116 aa9.77□□□□□ -0.85
SORL1-208ENST00000529445 IGHV2-26A0A0B4J1V2 119 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 A6NDX4 124 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 PSPNO60542 156 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 MT-ND2P03891 347 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 VSIG10L2P0DP72 767 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 DUSP1P28562 367 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 ERP29P30040 261 aaKnown RBP9.76□□□□□ -0.85
SORL1-208ENST00000529445 OR3A1P47881 315 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 SNU13P55769 128 aaKnown RBP9.76□□□□□ -0.85
SORL1-208ENST00000529445 PDZK1IP1Q13113 114 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 KPNB1Q14974 876 aaKnown RBP9.76□□□□□ -0.85
SORL1-208ENST00000529445 ZIK1Q3SY52 487 aaPredicted RBP9.76□□□□□ -0.85
SORL1-208ENST00000529445 TMEM219Q86XT9 240 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 Q8N2B8 174 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 TPRX1Q8N7U7 411 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 C11orf44Q8N8P7 122 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 OR4S1Q8NGB4 309 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 OR52N4Q8NGI2 321 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 NDNFQ8TB73 568 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 RFT1Q96AA3 541 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 PELI1Q96FA3 418 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 C4orf36Q96KX1 117 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 CLEC7AQ9BXN2 247 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 TMEM133Q9H2Q1 129 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 RHOFQ9HBH0 211 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 HMG20AQ9NP66 347 aa9.76□□□□□ -0.85
SORL1-208ENST00000529445 EXOSC4Q9NPD3 245 aaKnown RBP9.76□□□□□ -0.85
SORL1-208ENST00000529445 UBE2J1Q9Y385 318 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms