RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 XKRXQ6PP77 449 aa2.53□□□□□ -2
CD44-229ENST00000528672 SLC25A48Q6ZT89 311 aaKnown RBP2.53□□□□□ -2
CD44-229ENST00000528672 LINC01551Q86U37 167 aa2.53□□□□□ -2
CD44-229ENST00000528672 C10orf107Q8IVU9 208 aa2.53□□□□□ -2
CD44-229ENST00000528672 BLIDQ8IZY5 108 aa2.53□□□□□ -2
CD44-229ENST00000528672 DAW1Q8N136 415 aa2.53□□□□□ -2
CD44-229ENST00000528672 SLC39A11Q8N1S5 342 aa2.53□□□□□ -2
CD44-229ENST00000528672 SLC35F6Q8N357 371 aa2.53□□□□□ -2
CD44-229ENST00000528672 LRRC25Q8N386 305 aaPredicted RBP2.53□□□□□ -2
CD44-229ENST00000528672 C12orf45Q8N5I9 185 aaPredicted RBP2.53□□□□□ -2
CD44-229ENST00000528672 GDPD1Q8N9F7 314 aa2.53□□□□□ -2
CD44-229ENST00000528672 VN1R2Q8NFZ6 395 aa2.53□□□□□ -2
CD44-229ENST00000528672 GPR32P1Q8NGA4 272 aa2.53□□□□□ -2
CD44-229ENST00000528672 OR4M2Q8NGB6 313 aa2.53□□□□□ -2
CD44-229ENST00000528672 OR51S1Q8NGJ8 323 aa2.53□□□□□ -2
CD44-229ENST00000528672 OR13C4Q8NGS5 318 aa2.53□□□□□ -2
CD44-229ENST00000528672 ACER1Q8TDN7 264 aa2.53□□□□□ -2
CD44-229ENST00000528672 OR8D1Q8WZ84 308 aa2.53□□□□□ -2
CD44-229ENST00000528672 SEH1LQ96EE3 360 aa2.53□□□□□ -2
CD44-229ENST00000528672 NARS2Q96I59 477 aaKnown RBP2.53□□□□□ -2
CD44-229ENST00000528672 HSFY1Q96LI6 401 aa2.53□□□□□ -2
CD44-229ENST00000528672 COL21A1Q96P44 957 aa2.53□□□□□ -2
CD44-229ENST00000528672 MS4A4EQ96PG1 132 aa2.53□□□□□ -2
CD44-229ENST00000528672 P2RX4Q99571 388 aa2.53□□□□□ -2
CD44-229ENST00000528672 TBX5Q99593 518 aa2.53□□□□□ -2
CD44-229ENST00000528672 GPR22Q99680 433 aa2.53□□□□□ -2
CD44-229ENST00000528672 VGLL1Q99990 258 aa2.53□□□□□ -2
CD44-229ENST00000528672 OSBPL11Q9BXB4 747 aa2.53□□□□□ -2
CD44-229ENST00000528672 TMEM59Q9BXS4 323 aa2.53□□□□□ -2
CD44-229ENST00000528672 ACTR3CQ9C0K3 210 aaPredicted RBP2.53□□□□□ -2
CD44-229ENST00000528672 DSN1Q9H410 356 aa2.53□□□□□ -2
CD44-229ENST00000528672 FAM96AQ9H5X1 160 aa2.53□□□□□ -2
CD44-229ENST00000528672 ISG20L2Q9H9L3 353 aaKnown RBP2.53□□□□□ -2
CD44-229ENST00000528672 GNB4Q9HAV0 340 aa2.53□□□□□ -2
CD44-229ENST00000528672 PATZ1Q9HBE1 687 aaKnown RBP2.53□□□□□ -2
CD44-229ENST00000528672 RDH14Q9HBH5 336 aa2.53□□□□□ -2
CD44-229ENST00000528672 LHX9Q9NQ69 397 aa2.53□□□□□ -2
CD44-229ENST00000528672 SLC25A37Q9NYZ2 338 aa2.53□□□□□ -2
CD44-229ENST00000528672 SCP2D1Q9UJQ7 156 aa2.53□□□□□ -2
CD44-229ENST00000528672 SSR3Q9UNL2 185 aa2.53□□□□□ -2
CD44-229ENST00000528672 RPL26L1Q9UNX3 145 aaKnown RBP2.53□□□□□ -2
CD44-229ENST00000528672 C14orf166Q9Y224 244 aaKnown RBP2.53□□□□□ -2
CD44-229ENST00000528672 ZNF608Q9ULD9 1512 aaPredicted RBP2.52□□□□□ -2.01
CD44-229ENST00000528672 RTL1A6NKG5 1358 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 TMEM2Q9UHN6 1383 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 NSG1A0A0A6YYJ2 146 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 A0A0J9YWU9 116 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 GMNCA6NCL1 334 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 F6UZH7 168 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 H3BSA7 217 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 I3L4J1 428 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 K7ERU9 68 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 M0R143 59 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 SLC17A3O00476 420 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 CDX4O14627 284 aaPredicted RBP2.52□□□□□ -2.01
CD44-229ENST00000528672 GYG2O15488 501 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 SSNA1O43805 119 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 ORC5O43913 435 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 CDC40O60508 579 aaKnown RBP eCLIP2.52□□□□□ -2.01
CD44-229ENST00000528672 SLC16A7O60669 478 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 SPAG7O75391 227 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 RAB36O95755 333 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 CD160O95971 181 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 OXTP01178 125 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 IFNA17P01571 189 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 FGF1P05230 155 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 CSF3P09919 207 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 IGLL1P15814 213 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 TBPP20226 339 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 HTR1EP28566 365 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 NTSP30990 170 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 GGT2P36268 569 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 NSG1P42857 185 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 OR3A4PP47883 348 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 CX3CR1P49238 355 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 SLC25A1P53007 311 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 TCL1AP56279 114 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 RAB25P57735 213 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 BTN3A2P78410 334 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 RSU1Q15404 277 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 SHHQ15465 462 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 TAF9Q16594 264 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 PRSS8Q16651 343 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 OCIAD2Q56VL3 154 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 CPTPQ5TA50 214 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 OLFML2AQ68BL7 652 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 WDR74Q6RFH5 385 aaPredicted RBP2.52□□□□□ -2.01
CD44-229ENST00000528672 Q6ZN92 141 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 Q6ZT83 130 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 ZNF571Q7Z3V5 609 aaPredicted RBP2.52□□□□□ -2.01
CD44-229ENST00000528672 C17orf82Q86X59 251 aaPredicted RBP2.52□□□□□ -2.01
CD44-229ENST00000528672 DOLPP1Q86YN1 238 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 LYG1Q8N1E2 194 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 MS4A15Q8N5U1 240 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 ZNF557Q8N988 423 aaPredicted RBP2.52□□□□□ -2.01
CD44-229ENST00000528672 OR10G9Q8NGN4 311 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 OR5J2Q8NH18 312 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 SFXN5Q8TD22 340 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 HAVCR2Q8TDQ0 301 aa2.52□□□□□ -2.01
CD44-229ENST00000528672 SKA2Q8WVK7 121 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms