RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 CLIC3O95833 236 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 CST4P01036 141 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 IGHA1P01876 353 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 GNAO1P09471 354 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 CALCBP10092 127 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 PF4V1P10720 104 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 MYL12AP19105 171 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 CFL1P23528 166 aaKnown RBP5.3□□□□□ -1.56
CD44-221ENST00000526000 GABARAPL2P60520 117 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 ACTA2P62736 377 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 ACTG2P63267 376 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 CNN3Q15417 329 aaKnown RBP5.3□□□□□ -1.56
CD44-221ENST00000526000 KHDC1LQ5JSQ8 128 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 PLCXD3Q63HM9 321 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 C10orf99Q6UWK7 81 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 ACP7Q6ZNF0 438 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 FAM220AQ7Z4H9 259 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 CENPVQ7Z7K6 275 aaPredicted RBP5.3□□□□□ -1.56
CD44-221ENST00000526000 SLC35F2Q8IXU6 374 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 ZNF679Q8IYX0 411 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 SYS1Q8N2H4 156 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 OR52H1Q8NGJ2 320 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 AQP3Q92482 292 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 MYDGFQ969H8 173 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 LGALS12Q96DT0 336 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 TMEM80Q96HE8 168 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 DMRTB1Q96MA1 342 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 MROQ9BYG7 248 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 DNTTIP1Q9H147 329 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 OR51I2Q9H344 312 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 RANBP3Q9H6Z4 567 aaPredicted RBP5.3□□□□□ -1.56
CD44-221ENST00000526000 MOB1AQ9H8S9 216 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 GPR173Q9NS66 373 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 PSORS1C1Q9UIG5 152 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 ZNF222Q9UK12 451 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 GTF2A1LQ9UNN4 478 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 DIMT1Q9UNQ2 313 aaKnown RBP5.3□□□□□ -1.56
CD44-221ENST00000526000 PCDHGB5Q9Y5G0 923 aa5.3□□□□□ -1.56
CD44-221ENST00000526000 METTL15A6NJ78 407 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 M0R129 80 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 SLC1A7O00341 560 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 PF4P02776 101 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 KRT8P05787 483 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 MRPL3P09001 348 aaKnown RBP5.29□□□□□ -1.56
CD44-221ENST00000526000 FAHP16930 419 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 VDAC2P45880 294 aaPredicted RBP5.29□□□□□ -1.56
CD44-221ENST00000526000 MAP2K3P46734 347 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 HAAOP46952 286 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 RIDAP52758 137 aaKnown RBP5.29□□□□□ -1.56
CD44-221ENST00000526000 EDDM3BP56851 147 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 GNG3P63215 75 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 GALEQ14376 348 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 ZNF829Q3KNS6 432 aaPredicted RBP5.29□□□□□ -1.56
CD44-221ENST00000526000 FAM76BQ5HYJ3 339 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 C9orf152Q5JTZ5 239 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 C11orf88Q6PI97 169 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 ZNF322Q6U7Q0 402 aaPredicted RBP5.29□□□□□ -1.56
CD44-221ENST00000526000 TMPRSS11AQ6ZMR5 421 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 BCDIN3DQ7Z5W3 292 aaKnown RBP5.29□□□□□ -1.56
CD44-221ENST00000526000 KRT77Q7Z794 578 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 ANGPTL5Q86XS5 388 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 STX19Q8N4C7 294 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 TPRX1Q8N7U7 411 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 ASCC1Q8N9N2 400 aaKnown RBP5.29□□□□□ -1.56
CD44-221ENST00000526000 CCDC54Q8NEL0 328 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 BPIFB6Q8NFQ5 453 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 OR10H4Q8NGA5 316 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 NDNFQ8TB73 568 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 CNIH3Q8TBE1 160 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 OR51E1Q8TCB6 317 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 RPS4Y2Q8TD47 263 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 GGHQ92820 318 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 SDSLQ96GA7 329 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 CNBD2Q96M20 576 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 OR8B4Q96RC9 309 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 OCSTAMPQ9BR26 566 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 RGCCQ9H4X1 137 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 DUSP21Q9H596 190 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 GPR84Q9NQS5 396 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 FKBP14Q9NWM8 211 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 TCF19Q9Y242 345 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 PIGLQ9Y2B2 252 aa5.29□□□□□ -1.56
CD44-221ENST00000526000 TMEM269A0A1B0GVZ9 245 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 hCG_1809904A0A1W2PP81 198 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 A0A1W2PPE2 198 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 FAM230AA0A1W2PPH8 454 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 A0A1W2PQL4 384 aaPredicted RBP5.28□□□□□ -1.56
CD44-221ENST00000526000 A0A1W2PR64 198 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 A0A1W2PRV1 198 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 DAPL1A0PJW8 107 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 FAM172BPA6NC97 362 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 FAM90A8PA6NJQ4 464 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 F2RL2O00254 374 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 RGS10O43665 173 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 MTRF1O75570 445 aaKnown RBP5.28□□□□□ -1.56
CD44-221ENST00000526000 NXPH2O95156 264 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 TNFAIP8O95379 198 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 NRASP01111 189 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 TK1P04183 234 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 CDK1P06493 297 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms