RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 RAB23Q9ULC3 237 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 SAMHD1Q9Y3Z3 626 aaKnown RBP1.65□□□□□ -2.15
CD44-215ENST00000525241 PLXNB3Q9ULL4 1909 aa1.65□□□□□ -2.15
CD44-215ENST00000525241 MYBPHLA2RUH7 354 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 K7ERS5 55 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 GATCO43716 136 aaKnown RBP1.64□□□□□ -2.15
CD44-215ENST00000525241 SLC37A4O43826 429 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 ZNF73O43830 326 aaPredicted RBP1.64□□□□□ -2.15
CD44-215ENST00000525241 ALOX12BO75342 701 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 CDS2O95674 445 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 CTSGP08311 255 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 TAC1P20366 129 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 TMEM241Q24JQ0 296 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 LINC00596Q86U02 117 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 NELFCDQ8IXH7 590 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 Q8NAQ8 132 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 QKIQ96PU8 341 aaKnown RBP eCLIP1.64□□□□□ -2.15
CD44-215ENST00000525241 OR2M4Q96R27 311 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 TRIB3Q96RU7 358 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 KLF6Q99612 283 aaPredicted RBP1.64□□□□□ -2.15
CD44-215ENST00000525241 ANP32EQ9BTT0 268 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 SLC38A1Q9H2H9 487 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 FBXO44Q9H4M3 255 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 LZTFL1Q9NQ48 299 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 C12orf4Q9NQ89 552 aa1.64□□□□□ -2.15
CD44-215ENST00000525241 A0A1B0GU33 70 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 OR2AT4A6NND4 320 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 LEUTXA8MZ59 168 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 PSCAO43653 123 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 COX7A2P2O60397 106 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 GMDSO60547 372 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 CGB3P0DN86 165 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 CGB7P0DN87 165 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 LIPCP11150 499 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 DYNC1I2Q13409 638 aaKnown RBP1.63□□□□□ -2.15
CD44-215ENST00000525241 TPBGQ13641 420 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 ATP6AP1LQ52LC2 224 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 CLEC12AQ5QGZ9 265 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 IDNKQ5T6J7 187 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 CYHR1Q6ZMK1 362 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 CA13Q8N1Q1 262 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 BPIFB6Q8NFQ5 453 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 OR51L1Q8NGJ5 315 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 APOBEC3DQ96AK3 386 aaPredicted RBP1.63□□□□□ -2.15
CD44-215ENST00000525241 NCOR1P1Q9H4R4 102 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 CRLF2Q9HC73 371 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 RPRD1BQ9NQG5 326 aaKnown RBP1.63□□□□□ -2.15
CD44-215ENST00000525241 ANXA10Q9UJ72 324 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 FLVCR2Q9UPI3 526 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 AP3M1Q9Y2T2 418 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 ITGB4P16144 1822 aa1.63□□□□□ -2.15
CD44-215ENST00000525241 TRAV8-7A0A075B6U6 113 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 SEC14L6B5MCN3 397 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 F5H5P2 479 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 J3QKU1 62 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 TCAPO15273 167 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 SLC31A1O15431 190 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 GYG2O15488 501 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 RLN2P04090 185 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 PRKACAP17612 351 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 TAL2Q16559 108 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 NDUFAF6Q330K2 333 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 ARHGAP18Q8N392 663 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 Q8NDZ9 215 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 C2orf15Q8WU43 125 aaKnown RBP1.62□□□□□ -2.15
CD44-215ENST00000525241 C22orf15Q8WYQ4 148 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 C20orf166-AS1Q96NR2 134 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 YPEL4Q96NS1 127 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 HIGD2AQ9BW72 106 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 GABARAPL1Q9H0R8 117 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 RHOFQ9HBH0 211 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 IFNKQ9P0W0 207 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 NOS1P29475 1434 aa1.62□□□□□ -2.15
CD44-215ENST00000525241 A0A1W2PPV4 95 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 SLC5A10A0PJK1 596 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 H3BMM0 161 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 ZNF593O00488 134 aaPredicted RBP1.61□□□□□ -2.15
CD44-215ENST00000525241 FFAR1O14842 300 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 HLA-AP01891 365 aaKnown RBP1.61□□□□□ -2.15
CD44-215ENST00000525241 GZMAP12544 262 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 MLNP12872 115 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 CBR1P16152 277 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 LGALS7P47929 136 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 ZNF181Q2M3W8 571 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 Q499Y3 187 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 TTMPQ5BVD1 217 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 UBE2NLQ5JXB2 153 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 C16orf87Q6PH81 154 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 GAPTQ8N292 157 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 UBE2WQ96B02 151 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 SDHAF3Q9NRP4 125 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 RBM12B-AS1Q9P1G2 102 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 AQRO60306 1485 aaKnown RBP eCLIP1.61□□□□□ -2.15
CD44-215ENST00000525241 BAHCC1Q9P281 2608 aa1.61□□□□□ -2.15
CD44-215ENST00000525241 OTOGLQ3ZCN5 2332 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 IGKV1D-37A0A075B6S9 117 aa1.6□□□□□ -2.15
CD44-215ENST00000525241 PSIP1O75475 530 aaKnown RBP1.6□□□□□ -2.15
CD44-215ENST00000525241 SNAI1O95863 264 aaPredicted RBP1.6□□□□□ -2.15
CD44-215ENST00000525241 HOXB8P17481 243 aaPredicted RBP1.6□□□□□ -2.15
CD44-215ENST00000525241 GPR4P46093 362 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms