RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SPRY1O43609 319 aaPredicted RBP10.38□□□□□ -0.75
VEGFA-225ENST00000523950 NOL3O60936 208 aaKnown RBP10.38□□□□□ -0.75
VEGFA-225ENST00000523950 SELLP14151 372 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 NDUFB7P17568 137 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 BCL3P20749 454 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 EPHA1P21709 976 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 PSMA1P25786 263 aaKnown RBP10.38□□□□□ -0.75
VEGFA-225ENST00000523950 MTNR1BP49286 362 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 BPIFB3P59826 476 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 MLLT11Q13015 90 aaPredicted RBP10.38□□□□□ -0.75
VEGFA-225ENST00000523950 TPBGQ13641 420 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 DOC2BQ14184 412 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 DDI2Q5TDH0 399 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 METTL11BQ5VVY1 283 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 CRIP3Q6Q6R5 217 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 CMTM4Q8IZR5 234 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 ZNRF1Q8ND25 227 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 OR51A2Q8NGJ7 313 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 OR5D18Q8NGL1 313 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 TBC1D15Q8TC07 691 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 RFT1Q96AA3 541 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 DERL3Q96Q80 235 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 SPACA5Q96QH8 159 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 OR14A2Q96R54 314 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 GPER1Q99527 375 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 BCL7BQ9BQE9 202 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 HMG20AQ9NP66 347 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 RBFOX1Q9NWB1 397 aaKnown RBP10.38□□□□□ -0.75
VEGFA-225ENST00000523950 OR14J1Q9UGF5 321 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 NUP50Q9UKX7 468 aa10.38□□□□□ -0.75
VEGFA-225ENST00000523950 IGKV1-12A0A0C4DH73 117 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 A0A1W2PPH5 198 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 F8VVB4 439 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 F8VWA3 439 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 K7N7A8 449 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 GABRPO00591 440 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 ANGPTL7O43827 346 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 HAND1O96004 215 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 IGKV1D-12P01611 117 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 TK1P04183 234 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 TMEM225BP0DP42 221 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 MMP9P14780 707 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 PRKACAP17612 351 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 FPR2P25090 351 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 ZNF93P35789 620 aaPredicted RBP10.37□□□□□ -0.75
VEGFA-225ENST00000523950 TGFBR2P37173 567 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 NPBWR2P48146 333 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 CAPZA1P52907 286 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 FGF12P61328 243 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 PDCD1Q15116 288 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 ELP2Q6IA86 826 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 ZNF773Q6PK81 442 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 LINC00299Q6ZSB3 139 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 ZNF367Q7RTV3 350 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 BATF2Q8N1L9 274 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 SVOPQ8N4V2 548 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 NKAIN3Q8N8D7 197 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 OR52N4Q8NGI2 321 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 OR5D13Q8NGL4 314 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 PPP1R35Q8TAP8 253 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 TNFAIP8L1Q8WVP5 186 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 H1FXQ92522 213 aaKnown RBP10.37□□□□□ -0.75
VEGFA-225ENST00000523950 SNX22Q96L94 193 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 WDFY2Q96P53 400 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 IL36GQ9NZH8 169 aa10.37□□□□□ -0.75
VEGFA-225ENST00000523950 NAV3Q8IVL0 2385 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 MEGF11A6BM72 1044 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 M0R1W7 72 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 TCF21O43680 179 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 ZNF780AO75290 641 aaPredicted RBP10.36□□□□□ -0.75
VEGFA-225ENST00000523950 ZNF737O75373 536 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 SC5DO75845 299 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 TOX4O94842 621 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 TFF1P04155 84 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 CPEP16870 476 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 CEBPDP49716 269 aaPredicted RBP10.36□□□□□ -0.75
VEGFA-225ENST00000523950 TMBIM6P55061 237 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 COL10A1Q03692 680 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 DCTN2Q13561 401 aaKnown RBP10.36□□□□□ -0.75
VEGFA-225ENST00000523950 ACSM3Q53FZ2 586 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 KLF17Q5JT82 389 aaPredicted RBP10.36□□□□□ -0.75
VEGFA-225ENST00000523950 UNQ9370/PRO34162Q6UXP9 181 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 ASCL4Q6XD76 172 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 C1orf122Q6ZSJ8 110 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 C9orf139Q6ZV77 190 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 USP43Q70EL4 1123 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 OR8H2Q8N162 312 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 FGFRL1Q8N441 504 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 Q8NFD4 153 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 ZNF418Q8TF45 676 aaPredicted RBP10.36□□□□□ -0.75
VEGFA-225ENST00000523950 PHYHIPQ92561 330 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 PPP1R14BQ96C90 147 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 MGLLQ99685 303 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 SUCNR1Q9BXA5 334 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 SIRPDQ9H106 197 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 EXOSC4Q9NPD3 245 aaKnown RBP10.36□□□□□ -0.75
VEGFA-225ENST00000523950 PCDHB16Q9NRJ7 776 aa10.36□□□□□ -0.75
VEGFA-225ENST00000523950 SETD2Q9BYW2 2564 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-225ENST00000523950 TRAV8-7A0A075B6U6 113 aa10.35□□□□□ -0.75
VEGFA-225ENST00000523950 TRAV40A0A0B4J280 105 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms