RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 IGLON5A6NGN9 336 aa7.33□□□□□ -1.24
CSMD1-213ENST00000523488 ZFP92A6NM28 416 aa7.33□□□□□ -1.24
CSMD1-213ENST00000523488 CNOT4O95628 575 aaKnown RBP7.33□□□□□ -1.24
CSMD1-213ENST00000523488 REG1AP05451 166 aa7.33□□□□□ -1.24
CSMD1-213ENST00000523488 TMEM50BP56557 158 aa7.33□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF266Q14584 549 aa7.33□□□□□ -1.24
CSMD1-213ENST00000523488 TRIP6Q15654 476 aaKnown RBP7.33□□□□□ -1.24
CSMD1-213ENST00000523488 ADIRFQ15847 76 aa7.33□□□□□ -1.24
CSMD1-213ENST00000523488 YAF2Q8IY57 180 aa7.33□□□□□ -1.24
CSMD1-213ENST00000523488 VSTM2LQ96N03 204 aa7.33□□□□□ -1.24
CSMD1-213ENST00000523488 TP53RKQ96S44 253 aa7.33□□□□□ -1.24
CSMD1-213ENST00000523488 MRPL27Q9P0M9 148 aaKnown RBP7.33□□□□□ -1.24
CSMD1-213ENST00000523488 B9D1Q9UPM9 204 aa7.33□□□□□ -1.24
CSMD1-213ENST00000523488 EMC9Q9Y3B6 208 aa7.33□□□□□ -1.24
CSMD1-213ENST00000523488 CLDN16Q9Y5I7 305 aa7.33□□□□□ -1.24
CSMD1-213ENST00000523488 SPAG17Q6Q759 2223 aa7.33□□□□□ -1.24
CSMD1-213ENST00000523488 C11orf98E9PRG8 122 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 ATXN7O15265 892 aaPredicted RBP7.32□□□□□ -1.24
CSMD1-213ENST00000523488 UMODP07911 640 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 TDGF1P13385 188 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 HIST1H1DP16402 221 aaKnown RBP7.32□□□□□ -1.24
CSMD1-213ENST00000523488 SELEP16581 610 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 CTGFP29279 349 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 RAB7AP51149 207 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 DEFB134Q4QY38 66 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 FAM78AQ5JUQ0 283 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 CNTD2Q9H8S5 307 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 PLSCR2Q9NRY7 297 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF701Q9NV72 531 aaPredicted RBP7.32□□□□□ -1.24
CSMD1-213ENST00000523488 DOCK8Q8NF50 2099 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 NSG1A0A0A6YYJ2 146 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 LOC107986453A0A1B0GWG9 222 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 METTL12A8MUP2 240 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 ST8SIA3O43173 380 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 RAD51DO75771 328 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 C8AP07357 584 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 TRIM61Q5EBN2 209 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 ZAR1Q86SH2 424 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 CMTM1Q8IZ96 169 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 FBXL14Q8N1E6 418 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 OR2I1PQ8NGU4 316 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 MSI2Q96DH6 328 aaKnown RBP7.32□□□□□ -1.24
CSMD1-213ENST00000523488 SDSLQ96GA7 329 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 MIEN1Q9BRT3 115 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 OR2J1Q9GZK6 312 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF581Q9P0T4 197 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 NKX6-3A6NJ46 265 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 H7BYZ3 331 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 CISD3P0C7P0 127 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 PNMTP11086 282 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 CD99P14209 185 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF823P16415 610 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 CHRNB4P30926 498 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 SNU13P55769 128 aaKnown RBP7.32□□□□□ -1.24
CSMD1-213ENST00000523488 TAS2R46P59540 309 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 ERVS71-1P61550 626 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 HIST1H3AP68431 136 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 ZP4Q12836 540 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 TPTE2P1Q5T6R2 138 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 WDR25Q64LD2 544 aaPredicted RBP7.32□□□□□ -1.24
CSMD1-213ENST00000523488 RTL6Q6ICC9 239 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 SLC22A24Q8N4F4 322 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 TIMM29Q9BSF4 260 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 FUT9Q9Y231 359 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 KIF26BQ2KJY2 2108 aa7.32□□□□□ -1.24
CSMD1-213ENST00000523488 DUXBA0A1W2PPF3 345 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 P2RY10O00398 339 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 B3GALT2O43825 422 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 NDUFB8O95169 186 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 CMPK1P30085 196 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 NPBWR2P48146 333 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 ELLP55199 621 aaPredicted RBP7.31□□□□□ -1.24
CSMD1-213ENST00000523488 RAB38P57729 211 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 CARD18P57730 90 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 FAM3BP58499 235 aaPredicted RBP7.31□□□□□ -1.24
CSMD1-213ENST00000523488 RHOGP84095 191 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 FAM189A2Q15884 450 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 PTCRAQ6ISU1 281 aaPredicted RBP7.31□□□□□ -1.24
CSMD1-213ENST00000523488 OGFOD3Q6PK18 319 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 PARS2Q7L3T8 475 aaKnown RBP7.31□□□□□ -1.24
CSMD1-213ENST00000523488 H1FOOQ8IZA3 346 aaPredicted RBP7.31□□□□□ -1.24
CSMD1-213ENST00000523488 OR51G1Q8NGK1 321 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 PLPPR1Q8TBJ4 325 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 RNASE8Q8TDE3 154 aaKnown RBP7.31□□□□□ -1.24
CSMD1-213ENST00000523488 TSLPQ969D9 159 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 IL22RA2Q969J5 263 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 TOMM40LQ969M1 308 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 FAM122AQ96E09 287 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 KNTC1P50748 2209 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 SAA2-SAA4A0A096LPE2 208 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 FAM221AA4D161 298 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 OR6C6A6NF89 314 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 MLNRO43193 412 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 DXOO77932 396 aaKnown RBP7.31□□□□□ -1.24
CSMD1-213ENST00000523488 ZNF888P0CJ79 500 aaPredicted RBP7.31□□□□□ -1.24
CSMD1-213ENST00000523488 GLI4P10075 376 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 ATP6V0CP27449 155 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 SFTPDP35247 375 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 RAB28P51157 221 aa7.31□□□□□ -1.24
CSMD1-213ENST00000523488 RANP62826 216 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms