RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 A0A0B4J293 547 aa13.09□□□□□ -0.31
CTNNA1-236ENST00000522792 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.09□□□□□ -0.31
CTNNA1-236ENST00000522792 HSPB6O14558 160 aa13.09□□□□□ -0.31
CTNNA1-236ENST00000522792 ZG16O60844 167 aa13.09□□□□□ -0.31
CTNNA1-236ENST00000522792 PGA5P0DJD9 388 aa13.09□□□□□ -0.31
CTNNA1-236ENST00000522792 ADIPOQQ15848 244 aa13.09□□□□□ -0.31
CTNNA1-236ENST00000522792 SPRNQ5BIV9 151 aa13.09□□□□□ -0.31
CTNNA1-236ENST00000522792 NEUROG1Q92886 237 aa13.09□□□□□ -0.31
CTNNA1-236ENST00000522792 SNAPC3Q92966 411 aa13.09□□□□□ -0.31
CTNNA1-236ENST00000522792 MARVELD1Q9BSK0 173 aa13.09□□□□□ -0.31
CTNNA1-236ENST00000522792 ZNF701Q9NV72 531 aaPredicted RBP13.09□□□□□ -0.31
CTNNA1-236ENST00000522792 ADGRG4Q8IZF6 3080 aa13.08□□□□□ -0.31
CTNNA1-236ENST00000522792 FAM221AA4D161 298 aa13.08□□□□□ -0.31
CTNNA1-236ENST00000522792 INMT-MINDY4F8WBC2 141 aa13.08□□□□□ -0.31
CTNNA1-236ENST00000522792 OR4A8P0C604 315 aa13.08□□□□□ -0.31
CTNNA1-236ENST00000522792 FUT3P21217 361 aa13.08□□□□□ -0.31
CTNNA1-236ENST00000522792 NHLRC3Q5JS37 347 aa13.08□□□□□ -0.31
CTNNA1-236ENST00000522792 DMRTC2Q8IXT2 367 aaPredicted RBP13.08□□□□□ -0.31
CTNNA1-236ENST00000522792 OR51S1Q8NGJ8 323 aa13.08□□□□□ -0.31
CTNNA1-236ENST00000522792 CREB3L1Q96BA8 519 aa13.08□□□□□ -0.31
CTNNA1-236ENST00000522792 NRIP2Q9BQI9 281 aa13.08□□□□□ -0.31
CTNNA1-236ENST00000522792 ZNF442Q9H7R0 627 aa13.08□□□□□ -0.31
CTNNA1-236ENST00000522792 FLVCR2Q9UPI3 526 aa13.08□□□□□ -0.31
CTNNA1-236ENST00000522792 NUBP2Q9Y5Y2 271 aa13.08□□□□□ -0.31
CTNNA1-236ENST00000522792 SMG1Q96Q15 3661 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 hCG_1807616A0A1W2PRN6 198 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 TUBAL3A6NHL2 446 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 SHISA9B4DS77 424 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 NXPH2O95156 264 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 PMP2P02689 132 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 PRB1P04280 392 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 AMY2AP04746 511 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 ZNF81P51508 661 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 ERVK11-1P61568 191 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 SORDQ00796 357 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 TFF3Q07654 80 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 BBC3Q96PG8 261 aaPredicted RBP13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 CMSS1Q9BQ75 279 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 OCSTAMPQ9BR26 566 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 C20orf85Q9H1P6 137 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 PLK3Q9H4B4 646 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 C1orf123Q9NWV4 160 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 IGSF10Q6WRI0 2623 aa13.08□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A10PA6NDY2 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A18PA6NE21 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A16PA6NEW6 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A20PA6NIJ5 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A8PA6NJQ4 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A7PA6NKC0 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A22PA8MWA6 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A12PA8MX19 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A5PA8MXJ8 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A23PA8MXZ1 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 WNT9BO14905 357 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 CD74P04233 296 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 CD3EP07766 207 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A15PP0C7V4 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A13PP0C7W8 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A14PP0C7W9 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 FAM90A24PP0C7X0 464 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 HRH1P35367 487 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 MRPS15P82914 257 aaKnown RBP13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 TATDN3Q17R31 274 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 MPV17LQ2QL34 196 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 RNASE10Q5GAN6 216 aaKnown RBP13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 WDR82Q6UXN9 313 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 BTN2A1Q7KYR7 527 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 POC1AQ8NBT0 407 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 OR4K15Q8NH41 348 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 DEDD2Q8WXF8 326 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 OR2V2Q96R30 315 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 TLNRD1Q9H1K6 362 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 COPZ2Q9P299 210 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 ZNF107Q9UII5 783 aaPredicted RBP13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 ANAPC10Q9UM13 185 aa13.07□□□□□ -0.32
CTNNA1-236ENST00000522792 CA11O75493 328 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 PLAUP00749 431 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 H2AFB2P0C5Z0 115 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 AMY2BP19961 511 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 CD200P41217 278 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 CBX5P45973 191 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 MZT1Q08AG7 82 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 HOGA1Q86XE5 327 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 Q8IYB0 196 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 BPIFB2Q8N4F0 458 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 MEGF10Q96KG7 1140 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 BEX2Q9BXY8 128 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 WDR13Q9H1Z4 485 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 BEX1Q9HBH7 125 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 ALG5Q9Y673 324 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 CACNA1BQ00975 2339 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 E7EQL1 145 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 HS3ST1O14792 307 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 ARPC1BO15143 372 aaKnown RBP13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 SIAH2O43255 324 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 ZNF735P0CB33 412 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 NAT1P18440 290 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 MICBQ29980 383 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 SCGB2B2Q4G0G5 96 aa13.06□□□□□ -0.32
CTNNA1-236ENST00000522792 BEST4Q8NFU0 473 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms