RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 SPRY1O43609 319 aaPredicted RBP10.48□□□□□ -0.73
CLCN3-210ENST00000515420 XPNPEP2O43895 674 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 HAND1O96004 215 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 RBP4P02753 201 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 CD1AP06126 327 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 HCKP08631 526 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 BCL3P20749 454 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 EEF1B2P24534 225 aaKnown RBP10.48□□□□□ -0.73
CLCN3-210ENST00000515420 BMXP51813 675 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 UBE2E1P51965 193 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 ZP1P60852 638 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 ACSM1Q08AH1 577 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 KISS1Q15726 138 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 YIF1BQ5BJH7 314 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 RNLSQ5VYX0 342 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 RUSC1-AS1Q66K80 236 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 AHSA2Q719I0 299 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 LDLRAD3Q86YD5 345 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 FAM185AQ8N0U4 392 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 OR8H2Q8N162 312 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 STX19Q8N4C7 294 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 NRG4Q8WWG1 115 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 GCDHQ92947 438 aaPredicted RBP10.48□□□□□ -0.73
CLCN3-210ENST00000515420 ZDHHC16Q969W1 377 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 TMEM106AQ96A25 262 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 SIRT7Q9NRC8 400 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 C19orf12Q9NSK7 152 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 RBFOX1Q9NWB1 397 aaKnown RBP10.48□□□□□ -0.73
CLCN3-210ENST00000515420 CLEC2DQ9UHP7 191 aa10.48□□□□□ -0.73
CLCN3-210ENST00000515420 IGKV1-12A0A0C4DH73 117 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 TRBV5-5A0A0J9YX44 114 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 ERICH4A6NGS2 130 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 MYL12BO14950 172 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 MAGEB3O15480 346 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 LALBAP00709 142 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 IGKV1D-12P01611 117 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 ALDOBP05062 364 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 HKR1P10072 659 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 PRKACAP17612 351 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 NPBWR2P48146 333 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 HSPA13P48723 471 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 AQP4P55087 323 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 WNT4P56705 351 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 RPL15P61313 204 aaKnown RBP10.47□□□□□ -0.73
CLCN3-210ENST00000515420 BDH1Q02338 343 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 MEF2CQ06413 473 aaPredicted RBP10.47□□□□□ -0.73
CLCN3-210ENST00000515420 TMEM200BQ69YZ2 307 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 C17orf107Q6ZR85 190 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 GDPD3Q7L5L3 318 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 BATF2Q8N1L9 274 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 PXT1Q8NFP0 134 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 BPIFB6Q8NFQ5 453 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 PPP1R35Q8TAP8 253 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 SSMEM1Q8WWF3 244 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 THRSPQ92748 146 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 RFT1Q96AA3 541 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 PGLYRP3Q96LB9 341 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 SPACA5Q96QH8 159 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 ERGIC3Q9Y282 383 aa10.47□□□□□ -0.73
CLCN3-210ENST00000515420 SF3B6Q9Y3B4 125 aaKnown RBP10.47□□□□□ -0.73
CLCN3-210ENST00000515420 SIRT4Q9Y6E7 314 aaPredicted RBP10.47□□□□□ -0.73
CLCN3-210ENST00000515420 MDFIC2A0A1B0GVS7 189 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 SH2D1BO14796 132 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 NPFFO15130 113 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 HOXA3O43365 443 aaPredicted RBP10.46□□□□□ -0.73
CLCN3-210ENST00000515420 GPX5O75715 221 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 MELTFP08582 738 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 FBP1P09467 338 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 FSTP19883 344 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 LMO1P25800 156 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 ERP29P30040 261 aaKnown RBP10.46□□□□□ -0.73
CLCN3-210ENST00000515420 C21orf33P30042 268 aaPredicted RBP10.46□□□□□ -0.73
CLCN3-210ENST00000515420 SOX2P48431 317 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 MTNR1BP49286 362 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 PPP3R1P63098 170 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 FOXL1Q12952 345 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 Q499Y3 187 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 MIDNQ504T8 468 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 C6orf141Q5SZD1 244 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 ELP2Q6IA86 826 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 ASPHD2Q6ICH7 369 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 C16orf87Q6PH81 154 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 C12orf54Q6X4T0 127 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 C11orf42Q8N5U0 333 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 NANOGP1Q8N7R0 232 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 CHST4Q8NCG5 386 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 GHSRQ92847 366 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 ANKRD60Q9BZ19 345 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 HEXA-AS1Q9H8Q6 139 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 EXOSC4Q9NPD3 245 aaKnown RBP10.46□□□□□ -0.73
CLCN3-210ENST00000515420 TMEM138Q9NPI0 162 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 SCN3BQ9NY72 215 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 IL36RNQ9UBH0 155 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 FAM96BQ9Y3D0 163 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 SOX21Q9Y651 276 aaPredicted RBP10.46□□□□□ -0.73
CLCN3-210ENST00000515420 LINC00312Q9Y6C7 94 aa10.46□□□□□ -0.73
CLCN3-210ENST00000515420 A0A0U1RQK1 487 aa10.45□□□□□ -0.74
CLCN3-210ENST00000515420 hADV38S2A0JD32 116 aa10.45□□□□□ -0.74
CLCN3-210ENST00000515420 TMEM82A0PJX8 343 aa10.45□□□□□ -0.74
CLCN3-210ENST00000515420 C17orf98A8MV24 154 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms