RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 EXO5Q9H790 373 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 TMEM185BQ9H7F4 350 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 CXorf21Q9HAI6 301 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 FANCEQ9HB96 536 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 TMEM9BQ9NQ34 198 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 MRPL40Q9NQ50 206 aaKnown RBP1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 ZNF355PQ9NSJ1 428 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 TREX1Q9NSU2 369 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 SLC39A1Q9NY26 324 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 ZNF282Q9UDV7 671 aaPredicted RBP1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 PISDQ9UG56 409 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 FBXO5Q9UKT4 447 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 NDUFAF1Q9Y375 327 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 CAB39Q9Y376 341 aaPredicted RBP1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 CSDC2Q9Y534 153 aaKnown RBP1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 ARL5AQ9Y689 179 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 GMEB1Q9Y692 573 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 NRCAMQ92823 1304 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 BRCA2P51587 3418 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 LTBP4Q8N2S1 1624 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 ZNF831Q5JPB2 1677 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 THSD7AQ9UPZ6 1657 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 PHIPQ8WWQ0 1821 aa1.29□□□□□ -2.2
SMARCAD1-208ENST00000514232 PCM1Q15154 2024 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 DOCK3Q8IZD9 2030 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 MYO10Q9HD67 2058 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 GOLGA4Q13439 2230 aaKnown RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 PRRC2BQ5JSZ5 2229 aaKnown RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 PDE4DIPQ5VU43 2346 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 LOC100130705A0A1B0GUX0 176 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 PLAC8L1A1L4L8 177 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 BBIP1A8MTZ0 92 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 H0YJX3 145 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 FXYD1O00168 92 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 PSMD11O00231 422 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 UPK1AO00322 258 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 GNGT2O14610 69 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 RRP8O43159 456 aaKnown RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 CACNG3O60359 315 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 OR1I1O60431 355 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 NIPSNAP2O75323 286 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 GCM2O75603 506 aaPredicted RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 SERPINB7O75635 380 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 GATBO75879 557 aaKnown RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 SULT1C4O75897 302 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 MYO1DO94832 1006 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 CDK14O94921 469 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 WISP3O95389 354 aaPredicted RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 UTS2O95399 124 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 CPSF4O95639 269 aaKnown RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 FADS2O95864 444 aaKnown RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 PAHP00439 452 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 PTHP01270 115 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 APCSP02743 223 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 C1QCP02747 245 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 EIF4EP06730 217 aaKnown RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 CRYGBP07316 175 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 CD3GP09693 182 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 CT45A6P0DMU7 189 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 CT45A5P0DMU8 189 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 CT45A7P0DMV0 189 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 SMIM10L2AP0DMW4 78 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 SMIM10L2BP0DMW5 78 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 CD37P11049 281 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 SPNP16150 400 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 IGFBP3P17936 291 aaPredicted RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 BCKDHBP21953 392 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 RPS12P25398 132 aaKnown RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 CA5AP35218 305 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 PSMD8P48556 350 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 POLR2JP52435 117 aaKnown RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 NKX2-5P52952 324 aaPredicted RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 ARPP19P56211 112 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 AP1S2P56377 157 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 ATP6V0D1P61421 351 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 VBP1P61758 197 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 NCS1P62166 190 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 RPL38P63173 70 aaKnown RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 IL5RAQ01344 420 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 IFITM3Q01628 133 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 SEMG2Q02383 582 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 EMX2Q04743 252 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 MXD1Q05195 221 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 PRKCDQ05655 676 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 MADCAM1Q13477 382 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 EBI3Q14213 229 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 ZNF846Q147U1 533 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 TSNQ15631 228 aaKnown RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 KCNJ8Q15842 424 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 MOGQ16653 247 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 RGS21Q2M5E4 152 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 PGGHGQ32M88 737 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 ZNF829Q3KNS6 432 aaPredicted RBP1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 CT45A1Q5HYN5 189 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 XAF1Q6GPH4 301 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 LAIR2Q6ISS4 152 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 LCN8Q6JVE9 175 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 NIPAL1Q6NVV3 410 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 TMEM53Q6P2H8 277 aa1.28□□□□□ -2.2
SMARCAD1-208ENST00000514232 ZNF773Q6PK81 442 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms