RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 MECP2P51608 486 aaKnown RBP5.59□□□□□ -1.51
CLDND1-229ENST00000513988 KRTAP10-2P60368 255 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 KLF5Q13887 457 aaPredicted RBP5.59□□□□□ -1.51
CLDND1-229ENST00000513988 EBI3Q14213 229 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 RGNQ15493 299 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 REEP3Q6NUK4 255 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 HEPN1Q6WQI6 88 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 LINC00596Q86U02 117 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 OR8H2Q8N162 312 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 TPRX1Q8N7U7 411 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 LRRC75AQ8NAA5 344 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 POC1AQ8NBT0 407 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 OR2T10Q8NGZ9 312 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 CASTOR1Q8WTX7 329 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 AQP3Q92482 292 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 REEP6Q96HR9 211 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 Q96M85 177 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 ZNF488Q96MN9 340 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 ZNF570Q96NI8 536 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 HIST1H2AAQ96QV6 131 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 OR51I2Q9H344 312 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 C11orf68Q9H3H3 251 aaKnown RBP5.59□□□□□ -1.51
CLDND1-229ENST00000513988 GAL3ST2Q9H3Q3 398 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 RANGRFQ9HD47 186 aaPredicted RBP5.59□□□□□ -1.51
CLDND1-229ENST00000513988 PARP11Q9NR21 331 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 NINJ2Q9NZG7 142 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 DCDC2Q9UHG0 476 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 ADAM18Q9Y3Q7 739 aa5.59□□□□□ -1.51
CLDND1-229ENST00000513988 TRAV27A0A087WT01 109 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 IGHV3-72A0A0B4J1Y9 119 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 TRAV10A0A0B4J240 114 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 hCG_38984A0A1B0GV85 526 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 ATP6V0E1O15342 81 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 CD247P20963 164 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 ASIPP42127 132 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 PRKXP51817 358 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 NME5P56597 212 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 ACTBP60709 375 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 GNG3P63215 75 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 MADCAM1Q13477 382 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 KPNB1Q14974 876 aaKnown RBP5.58□□□□□ -1.52
CLDND1-229ENST00000513988 TATDN3Q17R31 274 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 LRIF1Q5T3J3 769 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 HAGHLQ6PII5 290 aaPredicted RBP5.58□□□□□ -1.52
CLDND1-229ENST00000513988 MOB3BQ86TA1 216 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 RBM45Q8IUH3 476 aaKnown RBP5.58□□□□□ -1.52
CLDND1-229ENST00000513988 TIGD4Q8IY51 512 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 MICU2Q8IYU8 434 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 LINC00471Q8N535 108 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 Q8N6K4 173 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 SMYD1Q8NB12 490 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 OR51A7Q8NH64 312 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 ACMSDQ8TDX5 336 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 TMEM239Q8WW34 195 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 HPSE2Q8WWQ2 592 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 PIGCQ92535 297 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 VPS33AQ96AX1 596 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 NUAK2Q9H093 628 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 TMEM38AQ9H6F2 299 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 PLSCR3Q9NRY6 295 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 UBE2J1Q9Y385 318 aaPredicted RBP5.58□□□□□ -1.52
CLDND1-229ENST00000513988 MED31Q9Y3C7 131 aa5.58□□□□□ -1.52
CLDND1-229ENST00000513988 A0A1W2PN81 502 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 ZNF732B4DXR9 585 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 TGOLN2O43493 480 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 PLIN3O60664 434 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 MITFO75030 526 aaPredicted RBP5.57□□□□□ -1.52
CLDND1-229ENST00000513988 ZNF737O75373 536 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 AMBPP02760 352 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 ZCCHC18P0CG32 403 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 CFL1P23528 166 aaKnown RBP5.57□□□□□ -1.52
CLDND1-229ENST00000513988 OTX1P32242 354 aaPredicted RBP5.57□□□□□ -1.52
CLDND1-229ENST00000513988 CHRNA7P36544 502 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 CDK6Q00534 326 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 FADDQ13158 208 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 KRR1Q13601 381 aaKnown RBP5.57□□□□□ -1.52
CLDND1-229ENST00000513988 DIAPH2-AS1Q14236 149 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 CCDC153Q494R4 210 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 SLC36A3Q495N2 470 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 DNM1P34Q6PK57 102 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 MAVSQ7Z434 540 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 IZUMO1Q8IYV9 350 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 MINDY2Q8NBR6 621 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 OR8H1Q8NGG4 311 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 OR4C15Q8NGM1 316 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 OR52J3Q8NH60 311 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 OR9G1Q8NH87 305 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 DYNLRB2Q8TF09 96 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 PPP1R36Q96LQ0 422 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 Q96M66 194 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 COPS4Q9BT78 406 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 FUT8Q9BYC5 575 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 PNPOQ9NVS9 261 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 PTTG2Q9NZH5 202 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 CYB5R1Q9UHQ9 305 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 ENPP5Q9UJA9 477 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 PKHD1L1Q86WI1 4243 aa5.57□□□□□ -1.52
CLDND1-229ENST00000513988 KRTAP9-7A8MTY7 169 aa5.56□□□□□ -1.52
CLDND1-229ENST00000513988 SOX15O60248 233 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms