RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 NIPSNAP1Q9BPW8 284 aa14.92□□□□□ -0.02
HMGCS1-206ENST00000511774 CADM1Q9BY67 442 aaKnown RBP14.92□□□□□ -0.02
HMGCS1-206ENST00000511774 PKIBQ9C010 78 aa14.92□□□□□ -0.02
HMGCS1-206ENST00000511774 DCLRE1BQ9H816 532 aa14.92□□□□□ -0.02
HMGCS1-206ENST00000511774 NUFIP1Q9UHK0 495 aaKnown RBP14.92□□□□□ -0.02
HMGCS1-206ENST00000511774 MAGEL2Q9UJ55 1249 aa14.92□□□□□ -0.02
HMGCS1-206ENST00000511774 ZNF256Q9Y2P7 627 aaPredicted RBP14.92□□□□□ -0.02
HMGCS1-206ENST00000511774 SMAD5-AS1Q9Y6J3 95 aa14.92□□□□□ -0.02
HMGCS1-206ENST00000511774 U3KQV3 271 aa14.92□□□□□ -0.02
HMGCS1-206ENST00000511774 A0A1B0GTI1 187 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 SERPINE3A8MV23 424 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 DLGAP1O14490 977 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 SRSF10O75494 262 aaKnown RBP14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 GMNNO75496 209 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 H2AFXP16104 143 aaPredicted RBP14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 DUSP1P28562 367 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 CD34P28906 385 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 GP2P55259 537 aaKnown RBP14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 HLA-DRB5Q30154 266 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 OR5M8Q8NGP6 311 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 OR14K1Q8NGZ2 314 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 ZNF596Q8TC21 504 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 CEP19Q96LK0 163 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 NSMCE2Q96MF7 247 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 COPS3Q9UNS2 423 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 V9GYS6 101 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 FRAS1Q86XX4 4008 aa14.91□□□□□ -0.02
HMGCS1-206ENST00000511774 HAND1O96004 215 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 HSD17B1P14061 328 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 SLC2A5P22732 501 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 GABRR1P24046 479 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 OR3A1P47881 315 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 ZNF91Q05481 1191 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 LCN1P1Q5VSP4 162 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 HEPN1Q6WQI6 88 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 TRAPPC6BQ86SZ2 158 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 RTN4RL2Q86UN3 420 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 STPG2Q8N412 459 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 ITFG2Q969R8 447 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 CITED4Q96RK1 184 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 LAMP5Q9UJQ1 280 aa14.9□□□□□ -0.02
HMGCS1-206ENST00000511774 ALMS1Q8TCU4 4167 aa14.89□□□□□ -0.03
HMGCS1-206ENST00000511774 FAM230AA0A1W2PPH8 454 aa14.89□□□□□ -0.03
HMGCS1-206ENST00000511774 CALCBP10092 127 aa14.89□□□□□ -0.03
HMGCS1-206ENST00000511774 PEX2P28328 305 aa14.89□□□□□ -0.03
HMGCS1-206ENST00000511774 P2RX3P56373 397 aa14.89□□□□□ -0.03
HMGCS1-206ENST00000511774 ESRRGP62508 458 aa14.89□□□□□ -0.03
HMGCS1-206ENST00000511774 DIAPH2-AS1Q14236 149 aa14.89□□□□□ -0.03
HMGCS1-206ENST00000511774 CPOQ8IVL8 374 aa14.89□□□□□ -0.03
HMGCS1-206ENST00000511774 OR56B4Q8NH76 319 aa14.89□□□□□ -0.03
HMGCS1-206ENST00000511774 UBE2J1Q9Y385 318 aaPredicted RBP14.89□□□□□ -0.03
HMGCS1-206ENST00000511774 PRR23D1E9PI22 279 aaPredicted RBP14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 MAGEB4O15481 346 aaPredicted RBP14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 IGHG2P01859 326 aa14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 PRR23D2P0DMB1 279 aaPredicted RBP14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 MAGEA2P43356 314 aa14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 NPBWR2P48146 333 aa14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 KIR2DS1Q14954 304 aa14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 MICAQ29983 383 aa14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 ZNF260Q3ZCT1 412 aa14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 DEGS2Q6QHC5 323 aa14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 Q6ZSR3 168 aa14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 MEPCEQ7L2J0 689 aaKnown RBP14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 TEX47Q8TBZ9 253 aa14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 RBFOX1Q9NWB1 397 aaKnown RBP14.88□□□□□ -0.03
HMGCS1-206ENST00000511774 MGST3O14880 152 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 LY86O95711 162 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 MRPL3P09001 348 aaKnown RBP14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 FRMD6-AS1P0C7T7 363 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 FAM106CPP0CH98 169 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 ERP29P30040 261 aaKnown RBP14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 GLIPR1P48060 266 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 ARHGDIBP52566 201 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 ROM1Q03395 351 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 RBM39Q14498 530 aaKnown RBP14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 HNF4GQ14541 408 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 UBE2V2Q15819 145 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 CD300LDQ6UXZ3 194 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 PLEKHG7Q6ZR37 379 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 SLC25A26Q70HW3 274 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 SLC35E3Q7Z769 313 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 THNSL2Q86YJ6 484 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 COMMD1Q8N668 190 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 OR8U1Q8NH10 309 aa14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 EMG1Q92979 244 aaKnown RBP14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 SEBOXQ9HB31 216 aaPredicted RBP14.87□□□□□ -0.03
HMGCS1-206ENST00000511774 HERC2O95714 4834 aa14.86□□□□□ -0.03
HMGCS1-206ENST00000511774 A0A1W2PPI3 338 aa14.86□□□□□ -0.03
HMGCS1-206ENST00000511774 PRODHO43272 600 aa14.86□□□□□ -0.03
HMGCS1-206ENST00000511774 CEACAM3P40198 252 aa14.86□□□□□ -0.03
HMGCS1-206ENST00000511774 SNU13P55769 128 aaKnown RBP14.86□□□□□ -0.03
HMGCS1-206ENST00000511774 CBX1P83916 185 aa14.86□□□□□ -0.03
HMGCS1-206ENST00000511774 FHL3Q13643 280 aa14.86□□□□□ -0.03
HMGCS1-206ENST00000511774 OR52W1Q6IF63 320 aa14.86□□□□□ -0.03
HMGCS1-206ENST00000511774 ZNF679Q8IYX0 411 aa14.86□□□□□ -0.03
HMGCS1-206ENST00000511774 DRAM1Q8N682 238 aa14.86□□□□□ -0.03
HMGCS1-206ENST00000511774 CORO2AQ92828 525 aa14.86□□□□□ -0.03
HMGCS1-206ENST00000511774 MROQ9BYG7 248 aa14.86□□□□□ -0.03
HMGCS1-206ENST00000511774 YIPF3Q9GZM5 350 aa14.86□□□□□ -0.03
HMGCS1-206ENST00000511774 EDA2RQ9HAV5 297 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms