RNA–Protein interactions for RNA: ENST00000508284.5

SQSTM1-212, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-212ENST00000508284 A6NLC8 198 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 C3orf80F5H4A9 247 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 SLC17A2O00624 439 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 MAGEB3O15480 346 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 NRASP01111 189 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 HCKP08631 526 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 AZGP1P25311 298 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 SCAND1P57086 179 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 PAX2Q02962 417 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 UBE2V2Q15819 145 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 IDNKQ5T6J7 187 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 LYPD6Q86Y78 171 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 ZDHHC23Q8IYP9 409 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 BCL6BQ8N143 479 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 DNAAF1Q8NEP3 725 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 OR6M1Q8NGM8 313 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 OR8S1Q8NH09 359 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 C6orf62Q9GZU0 229 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 PLGRKTQ9HBL7 147 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 GPR173Q9NS66 373 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 C1orf123Q9NWV4 160 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 ABRACLQ9P1F3 81 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 DAPK2Q9UIK4 370 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 RHBDD3Q9Y3P4 386 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 MPC1Q9Y5U8 109 aa14.98□□□□□ -0.01
SQSTM1-212ENST00000508284 KIR2DS1A0A191URI9 304 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 hCG_1807616A0A1W2PRN6 198 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 LGALS8O00214 317 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 PPIAL4GP0DN37 164 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 CAPZA1P52907 286 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 BAMBIQ13145 260 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 RAB11BQ15907 218 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 C1orf100Q5SVJ3 147 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 PLCXD3Q63HM9 321 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 WDR25Q64LD2 544 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 MZT2AQ6P582 158 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 LHFPL2Q6ZUX7 228 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 JAGN1Q8N5M9 183 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 OR52N4Q8NGI2 321 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 PIGCQ92535 297 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 DUX5Q96PT3 197 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 TSC22D3Q99576 134 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 STEAP1Q9UHE8 339 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 SLC7A11Q9UPY5 501 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 PEX16Q9Y5Y5 336 aa14.97□□□□□ -0.01
SQSTM1-212ENST00000508284 TENM1Q9UKZ4 2725 aa14.96□□□□□ -0.01
SQSTM1-212ENST00000508284 TRAV38-1A0A0B4J264 116 aa14.96□□□□□ -0.01
SQSTM1-212ENST00000508284 TRAV40A0A0B4J280 105 aa14.96□□□□□ -0.01
SQSTM1-212ENST00000508284 IGHV4-38-2P0DP08 117 aa14.96□□□□□ -0.01
SQSTM1-212ENST00000508284 PRTN3P24158 256 aa14.96□□□□□ -0.01
SQSTM1-212ENST00000508284 ZNF93P35789 620 aaPredicted RBP14.96□□□□□ -0.01
SQSTM1-212ENST00000508284 NPY4RP50391 375 aa14.96□□□□□ -0.01
SQSTM1-212ENST00000508284 HOXA4Q00056 320 aaPredicted RBP14.96□□□□□ -0.01
SQSTM1-212ENST00000508284 PRDX4Q13162 271 aa14.96□□□□□ -0.01
SQSTM1-212ENST00000508284 UPRTQ96BW1 309 aa14.96□□□□□ -0.01
SQSTM1-212ENST00000508284 ETV7Q9Y603 341 aa14.96□□□□□ -0.01
SQSTM1-212ENST00000508284 DOCK11Q5JSL3 2073 aa14.96□□□□□ -0.02
SQSTM1-212ENST00000508284 OOEPA6NGQ2 149 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 DNAJC9-AS1A6NH13 148 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 OR5B21A6NL26 309 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 ZNF850A8MQ14 1090 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 ADAM20O43506 726 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 NDUFA2O43678 99 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 ENSAO43768 121 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 PTBP3O95758 552 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 CALCBP10092 127 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 SLC2A2P11168 524 aaPredicted RBP14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 HTR2CP28335 458 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 S100A5P33763 92 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 FUT6P51993 359 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 LSAMPQ13449 338 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 HES5Q5TA89 166 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 CD276Q5ZPR3 534 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 ZNF841Q6ZN19 808 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 ZNF826PQ6ZT77 177 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 PNLDC1Q8NA58 520 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 OR6Q1Q8NGQ2 317 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 ZNF671Q8TAW3 534 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 TRMT10AQ8TBZ6 339 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 TBC1D15Q8TC07 691 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 LGALS14Q8TCE9 139 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 HPSE2Q8WWQ2 592 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 BORCS8Q96FH0 119 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 ZMAT3Q9HA38 289 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 LIN7BQ9HAP6 207 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 ADAM30Q9UKF2 790 aa14.95□□□□□ -0.02
SQSTM1-212ENST00000508284 RBP2P50120 134 aa14.94□□□□□ -0.02
SQSTM1-212ENST00000508284 FGF12P61328 243 aa14.94□□□□□ -0.02
SQSTM1-212ENST00000508284 FOXL1Q12952 345 aa14.94□□□□□ -0.02
SQSTM1-212ENST00000508284 KISS1Q15726 138 aa14.94□□□□□ -0.02
SQSTM1-212ENST00000508284 CEACAM21Q3KPI0 293 aa14.94□□□□□ -0.02
SQSTM1-212ENST00000508284 MOB3CQ70IA8 216 aa14.94□□□□□ -0.02
SQSTM1-212ENST00000508284 NPRL2Q8WTW4 380 aa14.94□□□□□ -0.02
SQSTM1-212ENST00000508284 SLC25A28Q96A46 364 aa14.94□□□□□ -0.02
SQSTM1-212ENST00000508284 DACT3Q96B18 629 aaPredicted RBP14.94□□□□□ -0.02
SQSTM1-212ENST00000508284 ITPKCQ96DU7 683 aa14.94□□□□□ -0.02
SQSTM1-212ENST00000508284 ZNF48Q96MX3 618 aaPredicted RBP14.94□□□□□ -0.02
SQSTM1-212ENST00000508284 WDFY2Q96P53 400 aa14.94□□□□□ -0.02
SQSTM1-212ENST00000508284 SPATA2Q9UM82 520 aa14.94□□□□□ -0.02
SQSTM1-212ENST00000508284 C22orf46C9J442 243 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms