RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 JSRP1Q96MG2 331 aaPredicted RBP11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 TP53RKQ96S44 253 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 RBM24Q9BX46 236 aaKnown RBP11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 SUCNR1Q9BXA5 334 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 METTL9Q9H1A3 318 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 TMPRSS5Q9H3S3 457 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 PLEK2Q9NYT0 353 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 HSF4Q9ULV5 492 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 TLX3O43711 291 aaPredicted RBP11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 IFNA17P01571 189 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 OTX1P32242 354 aaPredicted RBP11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 HTR5AP47898 357 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 RHBDD2Q6NTF9 364 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 ZNF343Q6P1L6 599 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 CPEB2Q7Z5Q1 589 aaKnown RBP11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 ZFP62Q8NB50 900 aaPredicted RBP11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 OR10AD1Q8NGE0 317 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 MUCL1Q96DR8 90 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 BOD1Q96IK1 185 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 UCN2Q96RP3 112 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 IGLV3-12A0A075B6K2 115 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 IGSF23A1L1A6 192 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 CCDC85CA6NKD9 419 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 ONECUT2O95948 504 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 CD63P08962 238 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 FBP1P09467 338 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 OMGP23515 440 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 MAS1LP35410 378 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 NXPH1P58417 271 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 RAB1AP62820 205 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 SPSB3Q6PJ21 355 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 SYT13Q7L8C5 426 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 LGI3Q8N145 548 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 OR4D5Q8NGN0 318 aa11.65□□□□□ -0.54
SNCAIP-209ENST00000508017 IGKV1-12A0A0C4DH73 117 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 NKX2-6A6NCS4 301 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 NDUFS6O75380 124 aaKnown RBP11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 IGKV1D-12P01611 117 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 DTYMKP23919 212 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 ATP6V0CP27449 155 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 HIST1H3AP68431 136 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 HIST2H3PS2Q5TEC6 136 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 ZNF574Q6ZN55 896 aaPredicted RBP11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 Q6ZSR3 168 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 HIST2H3AQ71DI3 136 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 C5orf24Q7Z6I8 188 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 C1QL4Q86Z23 238 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 OR2G3Q8NGZ4 309 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 TOLLIPQ9H0E2 274 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 SEMA5BQ9P283 1151 aa11.65□□□□□ -0.55
SNCAIP-209ENST00000508017 RBFOX3A6NFN3 312 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 H0YL77 283 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 H3BQ15 152 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 ATXN7O15265 892 aaPredicted RBP11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 AADACP22760 399 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 OR2B11Q5JQS5 317 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 C9orf152Q5JTZ5 239 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 C10orf128Q5T292 105 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 CARFQ8N187 725 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 BATF2Q8N1L9 274 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 LFNGQ8NES3 379 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 OR5L2Q8NGL0 311 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 TMEM54Q969K7 222 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 RAB39BQ96DA2 213 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 RASL10BQ96S79 203 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 PAPOLGQ9BWT3 736 aaKnown RBP11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 MTCH2Q9Y6C9 303 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 SDK2Q58EX2 2172 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 LOC102725191A0A1B0GVB3 256 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 A0A1B0GW64 132 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 ZNF724A8MTY0 619 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 SLC33A1O00400 549 aaPredicted RBP11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 DHHO43323 396 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 ZFAND5O76080 213 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 CXCL1P09341 107 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 HOXA5P20719 270 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 NDUFA6P56556 154 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 RAB2AP61019 212 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 PYY3Q5JQD4 70 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 FBXL14Q8N1E6 418 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 SLC25A45Q8N413 288 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 OR2C3Q8N628 320 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 TMEM171Q8WVE6 324 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 C11orf1Q9H5F2 150 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 LIPGQ9Y5X9 500 aa11.64□□□□□ -0.55
SNCAIP-209ENST00000508017 GLB1P16278 677 aa11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 AFF3P51826 1226 aaKnown RBP11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 RND3P61587 244 aa11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 H3F3AP84243 136 aa11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 GNMTQ14749 295 aa11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 SHBQ15464 509 aa11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 HIKESHIQ53FT3 197 aa11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 FADS6Q8N9I5 356 aa11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 Q8WTZ3 238 aa11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 MOB3AQ96BX8 217 aa11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 SPACA9Q96E40 222 aaPredicted RBP11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 OR6C1Q96RD1 312 aa11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 GPHA2Q96T91 129 aa11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 ANGPTL4Q9BY76 406 aa11.63□□□□□ -0.55
SNCAIP-209ENST00000508017 MAGT1Q9H0U3 335 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms