RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 METTL21CQ5VZV1 264 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 LINC00336Q6ZUF6 198 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 SLC35D2Q76EJ3 337 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR2W3Q7Z3T1 314 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 SETD3Q86TU7 594 aaPredicted RBP2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 C11orf53Q8IXP5 236 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 TRIML2Q8N7C3 387 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 GATSQ8NAP1 163 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 TMEM35BQ8NCS4 154 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 MDS2Q8NDY4 140 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 NOXO1Q8NFA2 376 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR4A15Q8NGL6 344 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZFP90Q8TF47 636 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 PDCD6IPQ8WUM4 868 aaKnown RBP2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 RNF138Q8WVD3 245 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 MRGPRFQ96AM1 343 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 RCN3Q96D15 328 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZIM3Q96PE6 472 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 MCEEQ96PE7 176 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZNF317Q96PQ6 595 aaPredicted RBP2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 PEBP4Q96S96 227 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 IFI27L2Q9H2X8 130 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 ARMC7Q9H6L4 198 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 KIR3DX1Q9H7L2 352 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR12D3Q9UGF7 316 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 PCYT1BQ9Y5K3 369 aaPredicted RBP2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 ATP6V1DQ9Y5K8 247 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 UTP20O75691 2785 aaKnown RBP2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 ANKRD17O75179 2603 aaKnown RBP2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 COL27A1Q8IZC6 1860 aaPredicted RBP2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 NYNRINQ9P2P1 1898 aaKnown RBP2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 IGHV3-64DA0A0J9YX35 117 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 IGHV5-10-1A0A0J9YXX1 117 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 LOC100506127A0A0U1RQW1 187 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 ANKRD65E5RJM6 399 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 PSMD11O00231 422 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 GABRPO00591 440 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 POLR1CO15160 346 aaPredicted RBP2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 NVLO15381 856 aaKnown RBP2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 CD5LO43866 347 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZNF861PO60384 105 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 RAD1O60671 282 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 KLK1P06870 262 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 CD3GP09693 182 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 PRPS2P11908 318 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 UCHL3P15374 230 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 TCP1P17987 556 aaKnown RBP2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 ACTR1BP42025 376 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 RPS10P46783 165 aaKnown RBP2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 HCAR3P49019 387 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZNF136P52737 540 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 GFERP55789 205 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 AP1S2P56377 157 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 TPI1P60174 286 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 MAXP61244 160 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 RPS23P62266 143 aaKnown RBP2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 ARG2P78540 354 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 XIAPP98170 497 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 DGCR6Q14129 220 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 RCAN2Q14206 197 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZNF266Q14584 549 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 KIR2DS1Q14954 304 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 ELOCQ15369 112 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 RGNQ15493 299 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 STK11Q15831 433 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 DEFB109BQ30KR1 87 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 Q3ZCU0 254 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 PRMT9Q6P2P2 845 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 DNAJC24Q6P3W2 148 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 WDR59Q6PJI9 974 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 PLET1Q6UQ28 207 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 FBXW12Q6X9E4 464 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 GKN2Q86XP6 184 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 PCP2Q8IVA1 136 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 SPERTQ8NA61 448 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 DUSP18Q8NEJ0 188 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR10AD1Q8NGE0 317 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 LRRC20Q8TCA0 184 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 NAT14Q8WUY8 206 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 AGMATQ9BSE5 352 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 DHX35Q9H5Z1 703 aaKnown RBP2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 CTSFQ9UBX1 484 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZMAT5Q9UDW3 170 aaKnown RBP2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 RWDD2AQ9UIY3 292 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 COL6A6A6NMZ7 2263 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 RP1L1Q8IWN7 2480 aaPredicted RBP2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 ABCA12Q86UK0 2595 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 TEP1Q99973 2627 aaKnown RBP2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 NOTCH3Q9UM47 2321 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 CEP192Q8TEP8 1941 aa2.17□□□□□ -2.06
TRAPPC11-205ENST00000506426 DOPEY2Q9Y3R5 2298 aa2.16□□□□□ -2.06
TRAPPC11-205ENST00000506426 TRBV6-6A0A0A6YYG2 114 aa2.16□□□□□ -2.06
TRAPPC11-205ENST00000506426 IGHV3-66A0A0C4DH42 116 aa2.16□□□□□ -2.06
TRAPPC11-205ENST00000506426 PINLYPA6NC86 204 aa2.16□□□□□ -2.06
TRAPPC11-205ENST00000506426 HACD1B0YJ81 288 aa2.16□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZNF879B4DU55 563 aa2.16□□□□□ -2.06
TRAPPC11-205ENST00000506426 INS-IGF2F8WCM5 200 aa2.16□□□□□ -2.06
TRAPPC11-205ENST00000506426 H7C1H1 209 aa2.16□□□□□ -2.06
TRAPPC11-205ENST00000506426 H7C417 338 aa2.16□□□□□ -2.06
TRAPPC11-205ENST00000506426 MFSD11O43934 449 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms