RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 ZNF737O75373 536 aa16.91■□□□□ 0.3
SQSTM1-210ENST00000506042 ATP6V1E1P36543 226 aa16.91■□□□□ 0.3
SQSTM1-210ENST00000506042 CD83Q01151 205 aa16.91■□□□□ 0.3
SQSTM1-210ENST00000506042 CCBE1Q6UXH8 406 aaPredicted RBP16.91■□□□□ 0.3
SQSTM1-210ENST00000506042 BATF2Q8N1L9 274 aa16.91■□□□□ 0.3
SQSTM1-210ENST00000506042 DYNAPQ8N1N2 210 aa16.91■□□□□ 0.3
SQSTM1-210ENST00000506042 APOL4Q9BPW4 351 aa16.91■□□□□ 0.3
SQSTM1-210ENST00000506042 DPM3Q9P2X0 92 aa16.91■□□□□ 0.3
SQSTM1-210ENST00000506042 CCDC182A6NF36 153 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 LEUTXA8MZ59 168 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 TOR1AO14656 332 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 HAND1O96004 215 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 IGLL1P15814 213 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 PRKACGP22612 351 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 RBP2P50120 134 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 BLCAPP62952 87 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 PTGES3Q15185 160 aaKnown RBP16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 DNAL1Q4LDG9 190 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 DEFB121Q5J5C9 76 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 SLC25A26Q70HW3 274 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 CCDC197Q8NCU1 140 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 WIPF2Q8TF74 440 aaPredicted RBP16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 SLAMF9Q96A28 289 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 MCRIP2Q9BUT9 160 aaKnown RBP16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 CADM1Q9BY67 442 aaKnown RBP16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 CHST5Q9GZS9 411 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 PCDHB16Q9NRJ7 776 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 COPS3Q9UNS2 423 aa16.9■□□□□ 0.3
SQSTM1-210ENST00000506042 PRKDCP78527 4128 aaKnown RBP16.89■□□□□ 0.29
SQSTM1-210ENST00000506042 SH2D1BO14796 132 aa16.89■□□□□ 0.29
SQSTM1-210ENST00000506042 RPP14O95059 124 aaKnown RBP16.89■□□□□ 0.29
SQSTM1-210ENST00000506042 UBCP0CG48 685 aaKnown RBP16.89■□□□□ 0.29
SQSTM1-210ENST00000506042 CCL1P22362 96 aa16.89■□□□□ 0.29
SQSTM1-210ENST00000506042 PRKACBP22694 351 aa16.89■□□□□ 0.29
SQSTM1-210ENST00000506042 ERP29P30040 261 aaKnown RBP16.89■□□□□ 0.29
SQSTM1-210ENST00000506042 PRRX1P54821 245 aa16.89■□□□□ 0.29
SQSTM1-210ENST00000506042 Q6ZSR3 168 aa16.89■□□□□ 0.29
SQSTM1-210ENST00000506042 TMEM179BQ7Z7N9 219 aa16.89■□□□□ 0.29
SQSTM1-210ENST00000506042 DNAAF1Q8NEP3 725 aa16.89■□□□□ 0.29
SQSTM1-210ENST00000506042 TMEM163Q8TC26 289 aa16.89■□□□□ 0.29
SQSTM1-210ENST00000506042 WARS2Q9UGM6 360 aaKnown RBP16.89■□□□□ 0.29
SQSTM1-210ENST00000506042 A0A1B0GTI1 187 aa16.88■□□□□ 0.29
SQSTM1-210ENST00000506042 FAM90A22PA8MWA6 464 aa16.88■□□□□ 0.29
SQSTM1-210ENST00000506042 FKBP6O75344 327 aa16.88■□□□□ 0.29
SQSTM1-210ENST00000506042 SRSF10O75494 262 aaKnown RBP16.88■□□□□ 0.29
SQSTM1-210ENST00000506042 KPNB1Q14974 876 aaKnown RBP16.88■□□□□ 0.29
SQSTM1-210ENST00000506042 PLEKHG7Q6ZR37 379 aa16.88■□□□□ 0.29
SQSTM1-210ENST00000506042 CCDC121Q6ZUS5 278 aa16.88■□□□□ 0.29
SQSTM1-210ENST00000506042 FAM58AQ8N1B3 248 aa16.88■□□□□ 0.29
SQSTM1-210ENST00000506042 ABHD12Q8N2K0 398 aa16.88■□□□□ 0.29
SQSTM1-210ENST00000506042 OR4D6Q8NGJ1 314 aa16.88■□□□□ 0.29
SQSTM1-210ENST00000506042 SLC25A33Q9BSK2 321 aa16.88■□□□□ 0.29
SQSTM1-210ENST00000506042 MTCH1Q9NZJ7 389 aa16.88■□□□□ 0.29
SQSTM1-210ENST00000506042 TRBV2A0A0J9YWF9 115 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 A6NIN4 97 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 ADARB2-AS1A8MUL3 147 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 OOSP1A8MZH6 123 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 PRKYO43930 277 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 SULT1C4O75897 302 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 OR2F2O95006 317 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 OR2T7P0C7T2 308 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 SLC6A1P30531 599 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 P2RX3P56373 397 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 BDH1Q02338 343 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 HS3ST5Q8IZT8 346 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 TCEANCQ8N8B7 351 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 RFKQ969G6 155 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 MYCBPQ99417 103 aaPredicted RBP16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 RHOFQ9HBH0 211 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 ADGRL4Q9HBW9 690 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 EXOSC4Q9NPD3 245 aaKnown RBP16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 TAS2R3Q9NYW6 316 aa16.87■□□□□ 0.29
SQSTM1-210ENST00000506042 CMYA5Q8N3K9 4069 aa16.86■□□□□ 0.29
SQSTM1-210ENST00000506042 METTL15A6NJ78 407 aa16.86■□□□□ 0.29
SQSTM1-210ENST00000506042 GYG2O15488 501 aa16.86■□□□□ 0.29
SQSTM1-210ENST00000506042 ZNF20P17024 532 aa16.86■□□□□ 0.29
SQSTM1-210ENST00000506042 CD69Q07108 199 aa16.86■□□□□ 0.29
SQSTM1-210ENST00000506042 ODF4Q2M2E3 257 aa16.86■□□□□ 0.29
SQSTM1-210ENST00000506042 UNQ9370/PRO34162Q6UXP9 181 aa16.86■□□□□ 0.29
SQSTM1-210ENST00000506042 LHFPL2Q6ZUX7 228 aa16.86■□□□□ 0.29
SQSTM1-210ENST00000506042 CHST6Q9GZX3 395 aa16.86■□□□□ 0.29
SQSTM1-210ENST00000506042 MRM2Q9UI43 246 aaKnown RBP16.86■□□□□ 0.29
SQSTM1-210ENST00000506042 AMMECR1Q9Y4X0 333 aaPredicted RBP16.86■□□□□ 0.29
SQSTM1-210ENST00000506042 INMTO95050 263 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 LPLP06858 475 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 RPSAP08865 295 aaKnown RBP16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 FAM106CPP0CH98 169 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 PRKACAP17612 351 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 POU3F4P49335 361 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 MTCP1P56278 107 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 ZNF91Q05481 1191 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 ZNF146Q15072 292 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 TMEM95Q3KNT9 176 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 ABCA11PQ4W5N1 156 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 TMEM244Q5VVB8 128 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 FAHD1Q6P587 224 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 HEPN1Q6WQI6 88 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 CATSPERDQ86XM0 798 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 MYDGFQ969H8 173 aa16.85■□□□□ 0.29
SQSTM1-210ENST00000506042 SPSB1Q96BD6 273 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms