RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ZNF625Q96I27 306 aaPredicted RBP0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 ANP32EQ9BTT0 268 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 SRRQ9GZT4 340 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 PORCNQ9H237 461 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 NCOR1P1Q9H4R4 102 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 ARMC7Q9H6L4 198 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 C6orf50Q9HD87 102 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 LZTFL1Q9NQ48 299 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 CCL26Q9Y258 94 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 ZNF780BQ9Y6R6 833 aa0.75□□□□□ -2.29
HMGB1P29-201ENST00000505659 NEURL4Q96JN8 1562 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 NOS1P29475 1434 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 OTOFQ9HC10 1997 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 A0A1W2PRF3 423 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 A0A1W2PRM7 423 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 H7C2Y5 167 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 DFFAO00273 331 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 UPK1AO00322 258 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 CRTAPO75718 401 aaPredicted RBP0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 RHOCP08134 193 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 PMCHP20382 165 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 GABRR2P28476 465 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 CCT6AP40227 531 aaKnown RBP0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 PSMD4P55036 377 aaKnown RBP0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 GBE1Q04446 702 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 ST3GAL4Q11206 333 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 BCL2A1Q16548 175 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 HSP90AA4PQ58FG1 418 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 ULK3Q6PHR2 472 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 SLC35D2Q76EJ3 337 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR2W3Q7Z3T1 314 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 VTCN1Q7Z7D3 282 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 CNPY4Q8N129 248 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 TRAM1L1Q8N609 369 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 FAM184AQ8NB25 1140 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 PROKR2Q8NFJ6 384 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR5T3Q8NGG3 340 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR5C1Q8NGR4 320 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 ZFAND1Q8TCF1 268 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 PIH1D2Q8WWB5 315 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 TMEM234Q8WY98 164 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 TSGA10Q9BZW7 698 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 IL22Q9GZX6 179 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 BLZF1Q9H2G9 400 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 ASB7Q9H672 318 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 WDR55Q9H6Y2 383 aaPredicted RBP0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 C8orf33Q9H7E9 229 aaPredicted RBP0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 KIR3DX1Q9H7L2 352 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 AHSPQ9NZD4 102 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 IFNKQ9P0W0 207 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 PEF1Q9UBV8 284 aaKnown RBP0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 PSME2Q9UL46 239 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 TFR2Q9UP52 801 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 CFL2Q9Y281 166 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 FADS3Q9Y5Q0 445 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 ATG2BQ96BY7 2078 aa0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 ZNF638Q14966 1978 aaKnown RBP0.74□□□□□ -2.29
HMGB1P29-201ENST00000505659 AQRO60306 1485 aaKnown RBP eCLIP0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 SHANK3Q9BYB0 1731 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 WDR19Q8NEZ3 1342 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 ADAMTS7Q9UKP4 1686 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 TRPM6Q9BX84 2022 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 A0A1B0GTQ1 180 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 NCF1BA6NI72 391 aaPredicted RBP0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 NCF1CA8MVU1 366 aaPredicted RBP0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 TRDMT1O14717 391 aaKnown RBP0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 TCAPO15273 167 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 GATCO43716 136 aaKnown RBP0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 TRAPPC6AO75865 159 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 GCGP01275 180 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 KLK1P06870 262 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 SFTPCP11686 197 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 MLNP12872 115 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 HOXB8P17481 243 aaPredicted RBP0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 CSKP41240 450 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 HTR2BP41595 481 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 CLDN8P56748 225 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 DAOAP59103 153 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 TAS2R60P59551 318 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 PSMC5P62195 406 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 LCN2P80188 198 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 PRDX4Q13162 271 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 STK38Q15208 465 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 TOMM34Q15785 309 aaPredicted RBP0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 CDNFQ49AH0 187 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 ATP6AP1LQ52LC2 224 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 TTC32Q5I0X7 151 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 PIP5KL1Q5T9C9 394 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 CLEC19AQ6UXS0 136 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 LYZL2Q7Z4W2 148 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 ZNF738Q8NE65 137 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR8K1Q8NGG5 319 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 AGR3Q8TD06 166 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR8D1Q8WZ84 308 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 PEX13Q92968 403 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 CERS2Q96G23 380 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR2M4Q96R27 311 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 TSNAXQ99598 290 aaKnown RBP0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 RGCCQ9H4X1 137 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 RHOFQ9HBH0 211 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms