RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 MS4A8Q9BY19 250 aa1.7□□□□□ -2.14
CHD1-203ENST00000505657 SHCBP1LQ9BZQ2 653 aa1.7□□□□□ -2.14
CHD1-203ENST00000505657 SND1-IT1Q9HBX3 110 aa1.7□□□□□ -2.14
CHD1-203ENST00000505657 RWDD2AQ9UIY3 292 aa1.7□□□□□ -2.14
CHD1-203ENST00000505657 KLF13Q9Y2Y9 288 aaPredicted RBP1.7□□□□□ -2.14
CHD1-203ENST00000505657 A8MWL6 223 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 TCAPO15273 167 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 SHOX2O60902 331 aaPredicted RBP1.69□□□□□ -2.14
CHD1-203ENST00000505657 NDUFS6O75380 124 aaKnown RBP1.69□□□□□ -2.14
CHD1-203ENST00000505657 TNFAIP8O95379 198 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 NELFEP18615 380 aaKnown RBP1.69□□□□□ -2.14
CHD1-203ENST00000505657 MAGEA6P43360 314 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 CEACAM16Q2WEN9 425 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 IDNKQ5T6J7 187 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 MED27Q6P2C8 311 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 UGT2A3Q6UWM9 527 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 Q6ZT83 130 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 LRP11Q86VZ4 500 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 OR51Q1Q8NH59 317 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 FAM57AQ8TBR7 257 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 ORAOV1Q8WV07 137 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 IFT81Q8WYA0 676 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 ZMYND19Q96E35 227 aaPredicted RBP1.69□□□□□ -2.14
CHD1-203ENST00000505657 TVP23CQ96ET8 276 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 FMC1Q96HJ9 113 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 ATP6V1G3Q96LB4 118 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 RILPQ96NA2 401 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 NXF2Q9GZY0 626 aaKnown RBP1.69□□□□□ -2.14
CHD1-203ENST00000505657 ASB7Q9H672 318 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 WDR55Q9H6Y2 383 aaPredicted RBP1.69□□□□□ -2.14
CHD1-203ENST00000505657 OR2S2Q9NQN1 319 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 SDHAF3Q9NRP4 125 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 NLE1Q9NVX2 485 aaPredicted RBP1.69□□□□□ -2.14
CHD1-203ENST00000505657 RBM22Q9NW64 420 aaKnown RBP eCLIP1.69□□□□□ -2.14
CHD1-203ENST00000505657 MAT2BQ9NZL9 334 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 ZNF230Q9UIE0 474 aaPredicted RBP1.69□□□□□ -2.14
CHD1-203ENST00000505657 INSIG2Q9Y5U4 225 aa1.69□□□□□ -2.14
CHD1-203ENST00000505657 ZNF706Q9Y5V0 76 aaPredicted RBP1.69□□□□□ -2.14
CHD1-203ENST00000505657 EIF4G1Q04637 1599 aaKnown RBP1.68□□□□□ -2.14
CHD1-203ENST00000505657 LOC389332A0A1B0GUA5 103 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 F8VP50 259 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 PRAMEF26H0Y7S4 382 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 OR2A4O95047 310 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 BRI3O95415 125 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 CDK1P06493 297 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 OR4Q2P0C623 313 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 CD151P48509 253 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 KCNJ3P48549 501 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 CCL23P55773 120 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 RAB38P57729 211 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 TSPAN5P62079 268 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 PRKCDQ05655 676 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 ATP5G2Q06055 141 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 MEF2CQ06413 473 aaPredicted RBP1.68□□□□□ -2.14
CHD1-203ENST00000505657 BTN1A1Q13410 526 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 TPBGQ13641 420 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 ELOCQ15369 112 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 TRAM1Q15629 374 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 TRIP13Q15645 432 aaPredicted RBP1.68□□□□□ -2.14
CHD1-203ENST00000505657 SP6Q3SY56 376 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 ZNF678Q5SXM1 525 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 KCTD16Q68DU8 428 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 HBMQ6B0K9 141 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 ZNF470Q6ECI4 717 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 PRSS54Q6PEW0 395 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 MORN3Q6PF18 240 aaPredicted RBP1.68□□□□□ -2.14
CHD1-203ENST00000505657 ZNF773Q6PK81 442 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 TBPL2Q6SJ96 375 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 FAM231DQ6ZW35 169 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 LRRC6Q86X45 466 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 ZNF680Q8NEM1 530 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 OR2Y1Q8NGV0 311 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 NELFBQ8WX92 580 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 TNFRSF14Q92956 283 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 FXYD5Q96DB9 178 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 SERPINB11Q96P15 392 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 OR2A7Q96R45 310 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 CYTH2Q99418 400 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 ZNF649Q9BS31 505 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 ABCB9Q9NP78 766 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 PARP11Q9NR21 331 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 NRBP2Q9NSY0 501 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 TAS2R13Q9NYV9 303 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 DNAJC27Q9NZQ0 273 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 RBM12B-AS1Q9P1G2 102 aa1.68□□□□□ -2.14
CHD1-203ENST00000505657 ZNF638Q14966 1978 aaKnown RBP1.68□□□□□ -2.14
CHD1-203ENST00000505657 CACNA1SQ13698 1873 aa1.67□□□□□ -2.14
CHD1-203ENST00000505657 TRPC5OSA6NMA1 111 aa1.67□□□□□ -2.14
CHD1-203ENST00000505657 OR2AT4A6NND4 320 aa1.67□□□□□ -2.14
CHD1-203ENST00000505657 H3BP45 60 aa1.67□□□□□ -2.14
CHD1-203ENST00000505657 SMLR1H3BR10 107 aa1.67□□□□□ -2.14
CHD1-203ENST00000505657 UPK1AO00322 258 aa1.67□□□□□ -2.14
CHD1-203ENST00000505657 SULT1C2O00338 296 aa1.67□□□□□ -2.14
CHD1-203ENST00000505657 MFNGO00587 321 aa1.67□□□□□ -2.14
CHD1-203ENST00000505657 SGCEO43556 437 aa1.67□□□□□ -2.14
CHD1-203ENST00000505657 OR7C2O60412 319 aa1.67□□□□□ -2.14
CHD1-203ENST00000505657 RD3LP0DJH9 198 aa1.67□□□□□ -2.14
CHD1-203ENST00000505657 LGALS3P17931 250 aaKnown RBP1.67□□□□□ -2.14
CHD1-203ENST00000505657 SYT1P21579 422 aa1.67□□□□□ -2.14
CHD1-203ENST00000505657 IDH2P48735 452 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms