RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 DAZAP2Q15038 168 aaPredicted RBP10.31□□□□□ -0.76
UBE3D-206ENST00000505226 RHEBQ15382 184 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 GPR157Q5UAW9 335 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 SLC22A25Q6T423 547 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 HEPN1Q6WQI6 88 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 FBXW12Q6X9E4 464 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 CARFQ8N187 725 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 SLC35G3Q8N808 338 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 FADS6Q8N9I5 356 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 TMEM54Q969K7 222 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 C11orf1Q9H5F2 150 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 PLEK2Q9NYT0 353 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 FAM24AA6NFZ4 105 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 CCDC85CA6NKD9 419 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 FBP1P09467 338 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 CLINT1Q14677 625 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 RSU1Q15404 277 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 C10orf128Q5T292 105 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 SPSB3Q6PJ21 355 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 TMEM123Q8N131 208 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 OR4D5Q8NGN0 318 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 TMEM171Q8WVE6 324 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 JSRP1Q96MG2 331 aaPredicted RBP10.31□□□□□ -0.76
UBE3D-206ENST00000505226 GPHA2Q96T91 129 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 CHCHD2Q9Y6H1 151 aaPredicted RBP10.31□□□□□ -0.76
UBE3D-206ENST00000505226 TERTO14746 1132 aaKnown RBP10.31□□□□□ -0.76
UBE3D-206ENST00000505226 NTF4P34130 210 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 MAS1LP35410 378 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 EWSR1Q01844 656 aaKnown RBP eCLIP10.31□□□□□ -0.76
UBE3D-206ENST00000505226 ARL6IP1Q15041 203 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 RTL6Q6ICC9 239 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 FOXL2NBQ6ZUU3 175 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 CPEB2Q7Z5Q1 589 aaKnown RBP10.31□□□□□ -0.76
UBE3D-206ENST00000505226 BATF2Q8N1L9 274 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 ZIC4Q8N9L1 334 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 MR1Q95460 341 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 BOD1Q96IK1 185 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 OR6C1Q96RD1 312 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 METTL9Q9H1A3 318 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 MMP24Q9Y5R2 645 aa10.31□□□□□ -0.76
UBE3D-206ENST00000505226 IGSF23A1L1A6 192 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 ST8SIA3O43173 380 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 PHF1O43189 567 aaPredicted RBP10.3□□□□□ -0.76
UBE3D-206ENST00000505226 OR2C1O95371 312 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 PATE4P0C8F1 98 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 DUSP1P28562 367 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 ZNF343Q6P1L6 599 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 MEX3BQ6ZN04 569 aaKnown RBP10.3□□□□□ -0.76
UBE3D-206ENST00000505226 ODF3L1Q8IXM7 274 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 SPACA9Q96E40 222 aaPredicted RBP10.3□□□□□ -0.76
UBE3D-206ENST00000505226 GGACTQ9BVM4 153 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 MTCH2Q9Y6C9 303 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 NKX2-6A6NCS4 301 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 ZFAND5O76080 213 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 ONECUT2O95948 504 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 HTR5AP47898 357 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 WDR74Q6RFH5 385 aaPredicted RBP10.3□□□□□ -0.76
UBE3D-206ENST00000505226 SUMF1Q8NBK3 374 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 OR5L2Q8NGL0 311 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 SLAMF9Q96A28 289 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 NTNG2Q96CW9 530 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 MUCL1Q96DR8 90 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 SUCNR1Q9BXA5 334 aa10.3□□□□□ -0.76
UBE3D-206ENST00000505226 ZNF724A8MTY0 619 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 DHHO43323 396 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 TLX3O43711 291 aaPredicted RBP10.29□□□□□ -0.76
UBE3D-206ENST00000505226 AADACP22760 399 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 OMGP23515 440 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 DTYMKP23919 212 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 S100PP25815 95 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 ITGA3P26006 1051 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 ATP6V0CP27449 155 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 IL13RA2Q14627 380 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 SOHLH1Q5JUK2 328 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 FBXL14Q8N1E6 418 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 ZFP62Q8NB50 900 aaPredicted RBP10.29□□□□□ -0.76
UBE3D-206ENST00000505226 ANGPTL4Q9BY76 406 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 STRAPQ9Y3F4 350 aaKnown RBP10.29□□□□□ -0.76
UBE3D-206ENST00000505226 G3V3Y1 287 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 GDF9O60383 454 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 EPHA1P21709 976 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 CRYGSP22914 178 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 GUCA1AP43080 201 aaPredicted RBP10.29□□□□□ -0.76
UBE3D-206ENST00000505226 SHBQ15464 509 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 SP5Q6BEB4 398 aaPredicted RBP10.29□□□□□ -0.76
UBE3D-206ENST00000505226 TCTEX1D2Q8WW35 142 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 FOXD3Q9UJU5 478 aaPredicted RBP10.29□□□□□ -0.76
UBE3D-206ENST00000505226 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 CXCL1P09341 107 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 RAB5CP51148 216 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 RND3P61587 244 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 ZNF774Q6NX45 483 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 RABEPKQ7Z6M1 372 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 C1QL4Q86Z23 238 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 MOB3AQ96BX8 217 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 TCEAL7Q9BRU2 100 aa10.29□□□□□ -0.76
UBE3D-206ENST00000505226 A0A1B0GW64 132 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 PROB1E7EW31 1015 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 H0YL77 283 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 H3BQ15 152 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms