RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 A6NLC8 198 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 C3orf80F5H4A9 247 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 SLC17A2O00624 439 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 MAGEB3O15480 346 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 NRASP01111 189 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 HCKP08631 526 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 AZGP1P25311 298 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 SCAND1P57086 179 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 PAX2Q02962 417 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 UBE2V2Q15819 145 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 IDNKQ5T6J7 187 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 LYPD6Q86Y78 171 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 ZDHHC23Q8IYP9 409 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 BCL6BQ8N143 479 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 DNAAF1Q8NEP3 725 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 OR6M1Q8NGM8 313 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 OR8S1Q8NH09 359 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 C6orf62Q9GZU0 229 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 PLGRKTQ9HBL7 147 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 GPR173Q9NS66 373 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 C1orf123Q9NWV4 160 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 ABRACLQ9P1F3 81 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 DAPK2Q9UIK4 370 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 RHBDD3Q9Y3P4 386 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 MPC1Q9Y5U8 109 aa14.98□□□□□ -0.01
SQSTM1-209ENST00000504627 KIR2DS1A0A191URI9 304 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 hCG_1807616A0A1W2PRN6 198 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 LGALS8O00214 317 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 PPIAL4GP0DN37 164 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 CAPZA1P52907 286 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 BAMBIQ13145 260 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 RAB11BQ15907 218 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 C1orf100Q5SVJ3 147 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 PLCXD3Q63HM9 321 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 WDR25Q64LD2 544 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 MZT2AQ6P582 158 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 LHFPL2Q6ZUX7 228 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 JAGN1Q8N5M9 183 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 OR52N4Q8NGI2 321 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 PIGCQ92535 297 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 DUX5Q96PT3 197 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 TSC22D3Q99576 134 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 STEAP1Q9UHE8 339 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 SLC7A11Q9UPY5 501 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 PEX16Q9Y5Y5 336 aa14.97□□□□□ -0.01
SQSTM1-209ENST00000504627 TENM1Q9UKZ4 2725 aa14.96□□□□□ -0.01
SQSTM1-209ENST00000504627 TRAV38-1A0A0B4J264 116 aa14.96□□□□□ -0.01
SQSTM1-209ENST00000504627 TRAV40A0A0B4J280 105 aa14.96□□□□□ -0.01
SQSTM1-209ENST00000504627 IGHV4-38-2P0DP08 117 aa14.96□□□□□ -0.01
SQSTM1-209ENST00000504627 PRTN3P24158 256 aa14.96□□□□□ -0.01
SQSTM1-209ENST00000504627 ZNF93P35789 620 aaPredicted RBP14.96□□□□□ -0.01
SQSTM1-209ENST00000504627 NPY4RP50391 375 aa14.96□□□□□ -0.01
SQSTM1-209ENST00000504627 HOXA4Q00056 320 aaPredicted RBP14.96□□□□□ -0.01
SQSTM1-209ENST00000504627 PRDX4Q13162 271 aa14.96□□□□□ -0.01
SQSTM1-209ENST00000504627 UPRTQ96BW1 309 aa14.96□□□□□ -0.01
SQSTM1-209ENST00000504627 ETV7Q9Y603 341 aa14.96□□□□□ -0.01
SQSTM1-209ENST00000504627 DOCK11Q5JSL3 2073 aa14.96□□□□□ -0.02
SQSTM1-209ENST00000504627 OOEPA6NGQ2 149 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 DNAJC9-AS1A6NH13 148 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 OR5B21A6NL26 309 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 ZNF850A8MQ14 1090 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 ADAM20O43506 726 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 NDUFA2O43678 99 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 ENSAO43768 121 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 PTBP3O95758 552 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 CALCBP10092 127 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 SLC2A2P11168 524 aaPredicted RBP14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 HTR2CP28335 458 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 S100A5P33763 92 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 FUT6P51993 359 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 LSAMPQ13449 338 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 HES5Q5TA89 166 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 CD276Q5ZPR3 534 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 ZNF841Q6ZN19 808 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 ZNF826PQ6ZT77 177 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 PNLDC1Q8NA58 520 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 OR6Q1Q8NGQ2 317 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 ZNF671Q8TAW3 534 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 TRMT10AQ8TBZ6 339 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 TBC1D15Q8TC07 691 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 LGALS14Q8TCE9 139 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 HPSE2Q8WWQ2 592 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 BORCS8Q96FH0 119 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 ZMAT3Q9HA38 289 aaKnown RBP14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 LIN7BQ9HAP6 207 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 ADAM30Q9UKF2 790 aa14.95□□□□□ -0.02
SQSTM1-209ENST00000504627 RBP2P50120 134 aa14.94□□□□□ -0.02
SQSTM1-209ENST00000504627 FGF12P61328 243 aa14.94□□□□□ -0.02
SQSTM1-209ENST00000504627 FOXL1Q12952 345 aa14.94□□□□□ -0.02
SQSTM1-209ENST00000504627 KISS1Q15726 138 aa14.94□□□□□ -0.02
SQSTM1-209ENST00000504627 CEACAM21Q3KPI0 293 aa14.94□□□□□ -0.02
SQSTM1-209ENST00000504627 MOB3CQ70IA8 216 aa14.94□□□□□ -0.02
SQSTM1-209ENST00000504627 NPRL2Q8WTW4 380 aa14.94□□□□□ -0.02
SQSTM1-209ENST00000504627 SLC25A28Q96A46 364 aa14.94□□□□□ -0.02
SQSTM1-209ENST00000504627 DACT3Q96B18 629 aaPredicted RBP14.94□□□□□ -0.02
SQSTM1-209ENST00000504627 ITPKCQ96DU7 683 aa14.94□□□□□ -0.02
SQSTM1-209ENST00000504627 ZNF48Q96MX3 618 aaPredicted RBP14.94□□□□□ -0.02
SQSTM1-209ENST00000504627 WDFY2Q96P53 400 aa14.94□□□□□ -0.02
SQSTM1-209ENST00000504627 SPATA2Q9UM82 520 aa14.94□□□□□ -0.02
SQSTM1-209ENST00000504627 C22orf46C9J442 243 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms