RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 DUXBA0A1W2PPF3 345 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 KLF7O75840 302 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 ZNF865P0CJ78 1059 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 CXCL2P19875 107 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 ZNF83P51522 516 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 RPS15AP62244 130 aaKnown RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 PRR31Q5SQ13 230 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 XAF1Q6GPH4 301 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 CDPF1Q6NVV7 123 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 H1FOOQ8IZA3 346 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 GALNT16Q8N428 558 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 IL22RA1Q8N6P7 574 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 OR4F5Q8NH21 305 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 OR4F4Q96R69 305 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 PBX4Q9BYU1 374 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 REG4Q9BYZ8 158 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 KATNBL1Q9H079 304 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 TMEM191AQ9H0A3 160 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 RAB6CQ9H0N0 254 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 ZNF286AQ9HBT8 521 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 Q9N2K0 584 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 NTMQ9P121 344 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 VPREB3Q9UKI3 123 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 PLAGL1Q9UM63 463 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 OR2T8A6NH00 312 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 ZNF670-ZNF695F2Z2N8 137 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 PPIAL4DF5H284 164 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 G3V4G9 280 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 RNASET2O00584 256 aaKnown RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 SP1P08047 785 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 PVRP15151 417 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 CRISP2P16562 243 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 MDKP21741 143 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 GAS1P54826 345 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 CAV3P56539 151 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 CD200R1LQ6Q8B3 271 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 SLC36A1Q7Z2H8 476 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 ATOH7Q8N100 152 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 OR2T33Q8NG76 320 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 OR8B3Q8NGG8 313 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 CPB2Q96IY4 423 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 NSUN5Q96P11 429 aaKnown RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 WDR61Q9GZS3 305 aaKnown RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 R4GN57 208 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 KAT6AQ92794 2004 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 TINCRA0A1B0GVN0 87 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 C9JAW5 83 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 WNT2P09544 360 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 EDN2P20800 178 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 KLRC2P26717 231 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 KIR2DL2P43627 348 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 POLR2JP52435 117 aaKnown RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 DLX6P56179 175 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 PDCD1Q15116 288 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 TMEM97Q5BJF2 176 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 LCN8Q6JVE9 175 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 OR10G2Q8NGC3 310 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 SMIM19Q96E16 107 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 C19orf24Q9BVV8 132 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 GP6Q9HCN6 339 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 HIGD1AQ9Y241 93 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 A0A1W2PRU2 124 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 TTC24A2A3L6 582 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 SNRPGP15A8MWD9 76 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 ZNF736B4DX44 427 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 SDHDO14521 159 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 MPPED1O15442 326 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 GPR137BO60478 399 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 SLC2A10O95528 541 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 RPL22P35268 128 aaKnown RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 TAS2R20P59543 309 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 SBSNQ6UWP8 590 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 SYS1Q8N2H4 156 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 NRGNQ92686 78 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 SLCO4A1Q96BD0 722 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 GPR82Q96P67 336 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 ELL3Q9HB65 397 aaPredicted RBP5.54□□□□□ -1.52
CLCN3-204ENST00000504131 MARCH5Q9NX47 278 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 TVP23BQ9NYZ1 205 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 PIPOXQ9P0Z9 390 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 ERG28Q9UKR5 140 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 SCN11AQ9UI33 1791 aa5.54□□□□□ -1.52
CLCN3-204ENST00000504131 A0A1W2PRD5 423 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 TCRBV5S4A2TA0A5A2 114 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 METTL12A8MUP2 240 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 CLDN5O00501 218 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 PTHP01270 115 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 HPXP02790 462 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 SCG5P05408 212 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 SMIM13P0DJ93 91 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 IRF1P10914 325 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 ZNF90Q03938 601 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 Q56UQ5 140 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 FAM162BQ5T6X4 162 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 DCAF12L2Q5VW00 463 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 TEX38Q6PEX7 206 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 GPSM1Q86YR5 675 aa5.53□□□□□ -1.52
CLCN3-204ENST00000504131 GPR135Q8IZ08 494 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms