RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 SARGQ9BW04 601 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 SF3B5Q9BWJ5 86 aaKnown RBP14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 FAM96BQ9Y3D0 163 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 FAM24AA6NFZ4 105 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 SEZ6L2Q6UXD5 910 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 OR10V1Q8NGI7 309 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 GPA33Q99795 319 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 GDF15Q99988 308 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 KCNK15Q9H427 330 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 M0R1X1 148 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 YIF1AO95070 293 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 MPGP29372 298 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 TMEM33P57088 247 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 MLF1P58340 268 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 IFITM3Q01628 133 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 TMEM267Q0VDI3 215 aaPredicted RBP14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 C1QL3Q5VWW1 255 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 BVESQ8NE79 360 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 C10orf35Q96D05 121 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 SCMH1Q96GD3 660 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 GNB4Q9HAV0 340 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 CLCF1Q9UBD9 225 aa14.29□□□□□ -0.12
HMGXB3-202ENST00000503427 OR2M5A3KFT3 312 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 PHOX2AO14813 284 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 ADAP1O75689 374 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 SLC52A3Q9NQ40 469 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 SEC16AO15027 2179 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 MIA3Q5JRA6 1907 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 CLEC18BQ6UXF7 455 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 SLC25A42Q86VD7 318 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 TM4SF19Q96DZ7 209 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 LIPT2A6NK58 231 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 SUMO1P63165 101 aaKnown RBP14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 SKP2Q13309 424 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 TMEM104Q8NE00 496 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 ANXA10Q9UJ72 324 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 MAP1LC3B2A6NCE7 125 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 LINC00862A6NCI5 91 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 CRYM-AS1A6NIL9 109 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 LPAR6P43657 344 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 ZFP36L2P47974 494 aaKnown RBP14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 TPPP2P59282 170 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 RANP62826 216 aaKnown RBP14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 LSM11P83369 360 aaKnown RBP eCLIP14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 PLAC9Q5JTB6 97 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 TRAT1Q6PIZ9 186 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 DGAT2L6Q6ZPD8 337 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 ZAR1Q86SH2 424 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 MAP1LC3BQ9GZQ8 125 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 TMPRSS5Q9H3S3 457 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 NTMQ9P121 344 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 FBP1P09467 338 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 RD3LP0DJH9 198 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 CA6P23280 308 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 TMEM241Q24JQ0 296 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 LGALSLQ3ZCW2 172 aaPredicted RBP14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 FFAR4Q5NUL3 377 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 LINC00052Q96N35 136 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 NDFIP1Q9BT67 221 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 RAB33BQ9H082 229 aa14.28□□□□□ -0.12
HMGXB3-202ENST00000503427 MYO16Q9Y6X6 1858 aa14.27□□□□□ -0.12
HMGXB3-202ENST00000503427 OR5B21A6NL26 309 aa14.27□□□□□ -0.12
HMGXB3-202ENST00000503427 STARD6P59095 220 aa14.27□□□□□ -0.12
HMGXB3-202ENST00000503427 ERVFC1-1P60608 527 aa14.27□□□□□ -0.12
HMGXB3-202ENST00000503427 SLC22A18ASQ8N1D0 253 aa14.27□□□□□ -0.12
HMGXB3-202ENST00000503427 KLHDC1Q8N7A1 406 aa14.27□□□□□ -0.12
HMGXB3-202ENST00000503427 B4E171 279 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 TSPAN7P41732 249 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 SNRPEP62304 92 aaKnown RBP14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 GLRX2Q9NS18 164 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 MMP24Q9Y5R2 645 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 EPOPA6NHQ4 379 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 ZNF66Q6ZN08 573 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 C17orf78Q8N4C9 275 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 PPP1R3EQ9H7J1 279 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 CACNG5Q9UF02 275 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 LSM2Q9Y333 95 aaKnown RBP14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 TMEM218A2RU14 115 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 PATE3B3GLJ2 98 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 HRKO00198 91 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 HRASP01112 189 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 TNFRSF1AP19438 455 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 FAM24BQ8N5W8 94 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 ASB5Q8WWX0 329 aa14.27□□□□□ -0.13
HMGXB3-202ENST00000503427 IL24Q13007 206 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 ZNF835Q9Y2P0 537 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 C7orf66A4D0T2 115 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 CD1AP06126 327 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 P2RY1P47900 373 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 NUFIP2Q7Z417 695 aaKnown RBP14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 SLC24A4Q8NFF2 622 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 ST6GALNAC2Q9UJ37 374 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 ARID2Q68CP9 1835 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 LOC285556D6RIA3 1793 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 TRAV8-7A0A075B6U6 113 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 CD200P41217 278 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 RPL11P62913 178 aaKnown RBP14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 GAB4Q2WGN9 574 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 ZNF501Q96CX3 271 aaPredicted RBP14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 PCDHGA9Q9Y5G4 932 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms