RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 PI3P19957 117 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 RRADP55042 308 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 UCP3P55916 312 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 ELP2Q6IA86 826 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 LINC00696Q6ZRV3 163 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 Q6ZS49 121 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 LINC00596Q86U02 117 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 TMEM200AQ86VY9 491 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 TUSC5Q8IXB3 177 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 ZDHHC23Q8IYP9 409 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 SLC38A6Q8IZM9 456 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 ZNF611Q8N823 705 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 CPEB3Q8NE35 698 aaKnown RBP10.36□□□□□ -0.75
NUP54-202ENST00000502850 SLC30A7Q8NEW0 376 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 FGFBP3Q8TAT2 258 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 MAFIPQ8WZ33 124 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 PAPOLGQ9BWT3 736 aaKnown RBP10.36□□□□□ -0.75
NUP54-202ENST00000502850 SUCNR1Q9BXA5 334 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 PIGMQ9H3S5 423 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 PLK3Q9H4B4 646 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 TMA7Q9Y2S6 64 aaKnown RBP10.36□□□□□ -0.75
NUP54-202ENST00000502850 USP24Q9UPU5 2620 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 A0A1W2PNU3 283 aaPredicted RBP10.35□□□□□ -0.75
NUP54-202ENST00000502850 PQLC2LA1A4F0 135 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 TEX46H3BTG2 121 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 GEMIN2O14893 280 aaKnown RBP10.35□□□□□ -0.75
NUP54-202ENST00000502850 ADAP1O75689 374 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 PTGER4P35408 488 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 PPIAP62937 165 aaKnown RBP10.35□□□□□ -0.75
NUP54-202ENST00000502850 SRPXP78539 464 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 SLC10A1Q14973 349 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 MPV17LQ2QL34 196 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 FAM209AQ5JX71 171 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 BAP18Q8IXM2 172 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 MKXQ8IYA7 352 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 FAM185AQ8N0U4 392 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 STPG2Q8N412 459 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 IL22RA1Q8N6P7 574 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 ZFP62Q8NB50 900 aaPredicted RBP10.35□□□□□ -0.75
NUP54-202ENST00000502850 TMEM178AQ8NBL3 297 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 OR56B2PQ8NGI1 322 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 OR5L1Q8NGL2 311 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 GALNT14Q96FL9 552 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 HIST1H2AAQ96QV6 131 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 SULT4A1Q9BR01 284 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 NAA60Q9H7X0 242 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 TNRC6AQ8NDV7 1962 aaKnown RBP10.35□□□□□ -0.75
NUP54-202ENST00000502850 CEP295Q9C0D2 2601 aa10.35□□□□□ -0.75
NUP54-202ENST00000502850 PIGBOS1A0A0B4J2F0 54 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 IGKV1-12A0A0C4DH73 117 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 RAB19A4D1S5 217 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 C5orf49A4QMS7 147 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 J3QW42 95 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 SS18L1O75177 396 aaPredicted RBP10.34□□□□□ -0.75
NUP54-202ENST00000502850 IGKV1D-12P01611 117 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 IGHV3-9P01782 118 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 CELA3AP09093 270 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 HERV-K104P61576 105 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 PRDX4Q13162 271 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 CEACAM21Q3KPI0 293 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 PIGYQ3MUY2 71 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 BEX5Q5H9J7 111 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 SLC22A25Q6T423 547 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 DHRS13Q6UX07 377 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 RELL2Q8NC24 303 aaPredicted RBP10.34□□□□□ -0.75
NUP54-202ENST00000502850 GALNT11Q8NCW6 608 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 RNF141Q8WVD5 230 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 SLC39A7Q92504 469 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 ZNF75AQ96N20 296 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 RNF126Q9BV68 326 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 HES7Q9BYE0 225 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 ZNF442Q9H7R0 627 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 SPACA1Q9HBV2 294 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 TUBD1Q9UJT1 453 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 FBXO9Q9UK97 447 aaPredicted RBP10.34□□□□□ -0.75
NUP54-202ENST00000502850 STARD10Q9Y365 291 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 ZNF175Q9Y473 711 aa10.34□□□□□ -0.75
NUP54-202ENST00000502850 FRYQ5TBA9 3013 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 IGKV1D-8A0A087WSZ0 117 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 OR5B21A6NL26 309 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 SFTPBP07988 381 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 HOXB5P09067 269 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 CD79AP11912 226 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 APLNRP35414 380 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 RFC3P40938 356 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 PIGPP57054 158 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 FGF12P61328 243 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 IL15RAQ13261 267 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 RBM39Q14498 530 aaKnown RBP10.33□□□□□ -0.76
NUP54-202ENST00000502850 IAH1Q2TAA2 248 aaPredicted RBP10.33□□□□□ -0.76
NUP54-202ENST00000502850 TFAP2EQ6VUC0 442 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 SLC25A26Q70HW3 274 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 LRTM2Q8N967 370 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 OR5A2Q8NGI9 324 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 ZCCHC14Q8WYQ9 949 aaKnown RBP10.33□□□□□ -0.76
NUP54-202ENST00000502850 MOB3AQ96BX8 217 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 CCDC120Q96HB5 630 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 LINC00052Q96N35 136 aa10.33□□□□□ -0.76
NUP54-202ENST00000502850 HDHD3Q9BSH5 251 aaPredicted RBP10.33□□□□□ -0.76
NUP54-202ENST00000502850 WDR13Q9H1Z4 485 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms