RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 CCBE1Q6UXH8 406 aaPredicted RBP13.64□□□□□ -0.23
LMNA-217ENST00000498722 OR56B2PQ8NGI1 322 aa13.64□□□□□ -0.23
LMNA-217ENST00000498722 TNFAIP8L1Q8WVP5 186 aa13.64□□□□□ -0.23
LMNA-217ENST00000498722 URM1Q9BTM9 101 aaKnown RBP13.64□□□□□ -0.23
LMNA-217ENST00000498722 RBFOX1Q9NWB1 397 aaKnown RBP13.64□□□□□ -0.23
LMNA-217ENST00000498722 ING4Q9UNL4 249 aa13.64□□□□□ -0.23
LMNA-217ENST00000498722 ABCA2Q9BZC7 2435 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 IGHV4-61A0A0C4DH41 118 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 FAM230AA0A1W2PPH8 454 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 LRP5LA4QPB2 252 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 ANKRD30BLA7E2S9 258 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 RP2O75695 350 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 CD3GP09693 182 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 CA6P23280 308 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 GDNFP39905 211 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 SRP9P49458 86 aaKnown RBP13.63□□□□□ -0.23
LMNA-217ENST00000498722 TMEM33P57088 247 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 SSBP1Q04837 148 aaKnown RBP13.63□□□□□ -0.23
LMNA-217ENST00000498722 UNC119Q13432 240 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 DYRK1AQ13627 763 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 AVPI1Q5T686 147 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 NRARPQ7Z6K4 114 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 DEDD2Q8WXF8 326 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 TIMD4Q96H15 378 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 ADAT1Q9BUB4 502 aaKnown RBP13.63□□□□□ -0.23
LMNA-217ENST00000498722 TMEM59Q9BXS4 323 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 METTL9Q9H1A3 318 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 PCDHB16Q9NRJ7 776 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 TAS2R8Q9NYW2 309 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 IL19Q9UHD0 177 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 PPP1R3CQ9UQK1 317 aa13.63□□□□□ -0.23
LMNA-217ENST00000498722 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.63□□□□□ -0.234e-7■■■■□ 23.7
LMNA-217ENST00000498722 DOCK11Q5JSL3 2073 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 A0A096LNT2 108 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 MLNRO43193 412 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 LANCL1O43813 399 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 ZNF780AO75290 641 aaPredicted RBP13.62□□□□□ -0.23
LMNA-217ENST00000498722 RBBP9O75884 186 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 HEXAP06865 529 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 PRSS3P35030 304 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 RFX2P48378 723 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 PRDX4Q13162 271 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 TMEM249Q2WGJ8 235 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 RNASE12Q5GAN4 147 aaKnown RBP13.62□□□□□ -0.23
LMNA-217ENST00000498722 OR10K2Q6IF99 312 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 PEG10Q86TG7 708 aaKnown RBP13.62□□□□□ -0.23
LMNA-217ENST00000498722 ZDHHC23Q8IYP9 409 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 OR52I2Q8NH67 350 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 DVL3Q92997 716 aaPredicted RBP13.62□□□□□ -0.23
LMNA-217ENST00000498722 C1orf147Q96MC9 270 aaPredicted RBP13.62□□□□□ -0.23
LMNA-217ENST00000498722 HIST1H2AAQ96QV6 131 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 PAPOLGQ9BWT3 736 aaKnown RBP13.62□□□□□ -0.23
LMNA-217ENST00000498722 AUNIPQ9H7T9 357 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 SCPEP1Q9HB40 452 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 RBMX2Q9Y388 322 aaKnown RBP13.62□□□□□ -0.23
LMNA-217ENST00000498722 NOP16Q9Y3C1 178 aaKnown RBP13.62□□□□□ -0.23
LMNA-217ENST00000498722 MPC1Q9Y5U8 109 aa13.62□□□□□ -0.23
LMNA-217ENST00000498722 C2CD3Q4AC94 2353 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 FAM240BA0A1B0GVZ2 78 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 NAP1L6A6NFF2 107 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 ZNF850A8MQ14 1090 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 ORC5O43913 435 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 CRTAPO75718 401 aaPredicted RBP13.61□□□□□ -0.23
LMNA-217ENST00000498722 KDM4BO94953 1096 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 MPIG6BO95866 241 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 TMEM225BP0DP42 221 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 SPNP16150 400 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 ZP1P60852 638 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 CEACAM21Q3KPI0 293 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 CRIP3Q6Q6R5 217 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 RNF144BQ7Z419 303 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 DUSP18Q8NEJ0 188 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 PXT1Q8NFP0 134 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 OR56B1Q8NGI3 324 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 RAB1CQ92928 201 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 MEGF10Q96KG7 1140 aa13.61□□□□□ -0.23
LMNA-217ENST00000498722 MRPL15Q9P015 296 aaKnown RBP13.61□□□□□ -0.23
LMNA-217ENST00000498722 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.6□□□□□ -0.23
LMNA-217ENST00000498722 RBMXP38159 391 aaKnown RBP13.6□□□□□ -0.23
LMNA-217ENST00000498722 BCAP31P51572 246 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 ACTBP60709 375 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 ACTG1P63261 375 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 KLF9Q13886 244 aaPredicted RBP13.6□□□□□ -0.23
LMNA-217ENST00000498722 ARL6IP1Q15041 203 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 SLC22A6Q4U2R8 563 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 PLET1Q6UQ28 207 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 MOGAT3Q86VF5 341 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 ZSCAN4Q8NAM6 433 aaPredicted RBP13.6□□□□□ -0.23
LMNA-217ENST00000498722 OR5A2Q8NGI9 324 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 OR5D18Q8NGL1 313 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 OR10R2Q8NGX6 335 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 OR8S1Q8NH09 359 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 LPAR5Q9H1C0 372 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 TMEM106BQ9NUM4 274 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 MTFP1Q9UDX5 166 aa13.6□□□□□ -0.23
LMNA-217ENST00000498722 HIVEP2P31629 2446 aa13.59□□□□□ -0.23
LMNA-217ENST00000498722 NSD1Q96L73 2696 aaPredicted RBP13.59□□□□□ -0.23
LMNA-217ENST00000498722 ANKRD20A5PA0PJZ0 165 aa13.59□□□□□ -0.23
LMNA-217ENST00000498722 FUOMA2VDF0 154 aa13.59□□□□□ -0.23
LMNA-217ENST00000498722 RAB27BO00194 218 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms