RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 FOXJ2Q9P0K8 574 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 CLDN16Q9Y5I7 305 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 R4GMQ9 66 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 KNL1Q8NG31 2342 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 H3BSH0 61 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 TOMM40O96008 361 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 PNMTP11086 282 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 PI3P19957 117 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 ATP6V0CP27449 155 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 ZNF41P51814 821 aaPredicted RBP7.95□□□□□ -1.14
HPS4-217ENST00000496385 ZNF141Q15928 474 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 C1QL3Q5VWW1 255 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 TMEFF1Q8IYR6 380 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 FBXL14Q8N1E6 418 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 NUDT10Q8NFP7 164 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 OR2L3Q8NG85 312 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 ARRDC3Q96B67 414 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 TBX15Q96SF7 602 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 AGMATQ9BSE5 352 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 B3GAT1Q9P2W7 334 aa7.95□□□□□ -1.14
HPS4-217ENST00000496385 MAP1LC3B2A6NCE7 125 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 RRP8O43159 456 aaKnown RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 ZNF888P0CJ79 500 aaPredicted RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 DUSP1P28562 367 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 GPR1P46091 355 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 CNN1P51911 297 aaKnown RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 CARD18P57730 90 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 PAFAH1B2P68402 229 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 ZFP36L1Q07352 338 aaKnown RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 GNMTQ14749 295 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 ZNF74Q16587 644 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 C1orf140Q5VVS0 124 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 ZNF776Q68DI1 518 aaPredicted RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 ETFRF1Q6IPR1 90 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 LCN10Q6JVE6 187 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 SULF2Q8IWU5 870 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 H1FOOQ8IZA3 346 aaPredicted RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 LINC01555Q8NAE3 123 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 OR51G1Q8NGK1 321 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 KCNG3Q8TAE7 436 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 MRPL24Q96A35 216 aaKnown RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 AMELYQ99218 206 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 LMF2Q9BU23 707 aaKnown RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 MAP1LC3BQ9GZQ8 125 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 LPAR5Q9H1C0 372 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 RYDENQ9NUL5 291 aaKnown RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 A0A0U1RQV5 110 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 ZNF705FA8MVS1 300 aaPredicted RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 SRSF10O75494 262 aaKnown RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 MMP23AO75900 390 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 ASAH2BP0C7U1 165 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 ZNF705DP0CH99 300 aaPredicted RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 ZNF705BP0CI00 300 aaPredicted RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 EPHA8P29322 1005 aaPredicted RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 GABRA3P34903 492 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 DRD3P35462 400 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 OR14C36Q8NHC7 312 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 ABHD14BQ96IU4 210 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 MS4A10Q96PG2 267 aa7.94□□□□□ -1.14
HPS4-217ENST00000496385 ELL3Q9HB65 397 aaPredicted RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 APOBEC3BQ9UH17 382 aaKnown RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 EP300Q09472 2414 aaPredicted RBP7.94□□□□□ -1.14
HPS4-217ENST00000496385 A0A1B0GV50 99 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 LOC107986453A0A1B0GWG9 222 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 SCGB1D2O95969 90 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 EMDP50402 254 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 RAB28P51157 221 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 BTN3A2P78410 334 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 EWSR1Q01844 656 aaKnown RBP eCLIP7.93□□□□□ -1.14
HPS4-217ENST00000496385 P2RY6Q15077 328 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 AGBL4Q5VU57 503 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 ZNF880Q6PDB4 577 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 LRRC69Q6ZNQ3 347 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 PARS2Q7L3T8 475 aaKnown RBP7.93□□□□□ -1.14
HPS4-217ENST00000496385 LINC01551Q86U37 167 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 ZFP62Q8NB50 900 aaPredicted RBP7.93□□□□□ -1.14
HPS4-217ENST00000496385 ZNF248Q8NDW4 579 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 C8orf44Q96CB5 159 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 ANAPC16Q96DE5 110 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 ALKBH3Q96Q83 286 aaPredicted RBP7.93□□□□□ -1.14
HPS4-217ENST00000496385 NAT8Q9UHE5 227 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 DMXL1Q9Y485 3027 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 CCL25O15444 150 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 YPEL1O60688 119 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 AHSA1O95433 338 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 P2RY2P41231 377 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 RAB11AP62491 216 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 LCN2P80188 198 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 CLEC2AQ6UVW9 174 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 NUS1Q96E22 293 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 BOD1Q96IK1 185 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 YPEL2Q96QA6 119 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 ALKBH7Q9BT30 221 aaPredicted RBP7.93□□□□□ -1.14
HPS4-217ENST00000496385 TMEM106BQ9NUM4 274 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 EHFQ9NZC4 300 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 OR6C3Q9NZP0 311 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 HSF4Q9ULV5 492 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 LAMP3Q9UQV4 416 aa7.93□□□□□ -1.14
HPS4-217ENST00000496385 THADAQ6YHU6 1953 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms