RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 PRRT4C9JH25 899 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 K7EQS6 105 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 CDIPTO14735 213 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 SPINT1O43278 529 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 PDGFBP01127 241 aaPredicted RBP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 MDH2P40926 338 aaKnown RBP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 LINC00310P59036 64 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 ARG2P78540 354 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 MEP1BQ16820 701 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 PRICKLE4Q2TBC4 344 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 PTCRAQ6ISU1 281 aaPredicted RBP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 OR5AR1Q8NGP9 310 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 OR2T10Q8NGZ9 312 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 SPSB1Q96BD6 273 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 MRGPRX1Q96LB2 322 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 ZNF552Q9H707 407 aaPredicted RBP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 TMEM9BQ9NQ34 198 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 MRPL22Q9NWU5 206 aaKnown RBP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 WSB2Q9NYS7 404 aaPredicted RBP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 LRIT1Q9P2V4 623 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 RNF212BA8MTL3 300 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 IFNA1P01562 189 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 FAHP16930 419 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 CD70P32970 193 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 DNASE1L1P49184 302 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 EMDP50402 254 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 RPL23P62829 140 aaKnown RBP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 DPY19L4Q7Z388 723 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 SPRED2Q7Z698 418 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 COMMD2Q86X83 199 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 RAB42Q8N4Z0 105 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 VN1R2Q8NFZ6 395 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 TMEM56Q96MV1 263 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 OR5B12Q96R08 314 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 ATP5SQ99766 215 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 C6orf106Q9H6K1 298 aaPredicted RBP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 GSKIPQ9P0R6 139 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 PRSS50Q9UI38 385 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 TP53TG3Q9ULZ0 132 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 B9D1Q9UPM9 204 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 SLC22A13Q9Y226 551 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 LRP12Q9Y561 859 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 TIMM9Q9Y5J7 89 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 TMEM56-RWDD3S4R434 201 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 KMT2EQ8IZD2 1858 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 HEATR5BQ9P2D3 2071 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 PIGBOS1A0A0B4J2F0 54 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 IGSF23A1L1A6 192 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 ERI3O43414 337 aaKnown RBP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 OR6A2O95222 327 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 NUDT14O95848 222 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 DBHP09172 617 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 MMP7P09237 267 aaPredicted RBP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 TNFSF4P23510 183 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 CAPZBP47756 277 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 CEBPGP53567 150 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 EMP2P54851 167 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 SERF2P84101 59 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 BSXQ3C1V8 233 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 MAJINQ3KP22 176 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 LRRC10Q5BKY1 277 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 KCNIP4Q6PIL6 250 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 SAMD7Q7Z3H4 446 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 LGI3Q8N145 548 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 C12orf76Q8N812 135 aaPredicted RBP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 CPT1CQ8TCG5 803 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 TMEM171Q8WVE6 324 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 FGF14Q92915 247 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 IL22RA2Q969J5 263 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 SLAMF6Q96DU3 332 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 CIB3Q96Q77 187 aaPredicted RBP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 ABHD14AQ9BUJ0 271 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 SMIM3Q9BZL3 60 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 FAM206AQ9NX38 181 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 LAMP3Q9UQV4 416 aa4.18□□□□□ -1.74
PRKD3-210ENST00000494667 LSM5Q9Y4Y9 91 aaKnown RBP4.18□□□□□ -1.74
PRKD3-210ENST00000494667 IGLC7A0M8Q6 106 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 FGF17O60258 216 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 FBXO45P0C2W1 286 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 AMY2BP19961 511 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 GRPRP30550 384 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 GRK6P43250 576 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 SULF2Q8IWU5 870 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 ZIC4Q8N9L1 334 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 OR1L6Q8NGR2 347 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 OR4S2Q8NH73 311 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 PARP12Q9H0J9 701 aaKnown RBP4.17□□□□□ -1.74
PRKD3-210ENST00000494667 CST9LQ9H4G1 147 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 ZDHHC6Q9H6R6 413 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 RRAGCQ9HB90 399 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 TBX21Q9UL17 535 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 INSL5Q9Y5Q6 135 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 TMEM131Q92545 1883 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 TRBV9A0A0B4J1U6 114 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 H7BYZ3 331 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 EXT1Q16394 746 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 SRSF7Q16629 238 aaKnown RBP eCLIP4.17□□□□□ -1.74
PRKD3-210ENST00000494667 TMEM52BQ4KMG9 183 aa4.17□□□□□ -1.74
PRKD3-210ENST00000494667 WBP2NLQ6ICG8 309 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms