RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 C18orf12Q96KH6 178 aa10.21□□□□□ -0.77
HDAC4-210ENST00000493582 PNO1Q9NRX1 252 aaKnown RBP10.21□□□□□ -0.77
HDAC4-210ENST00000493582 NPIPA1Q9UND3 350 aa10.21□□□□□ -0.77
HDAC4-210ENST00000493582 C5orf63A6NC05 138 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 FOXI3A8MTJ6 420 aaPredicted RBP10.21□□□□□ -0.78
HDAC4-210ENST00000493582 PROB1E7EW31 1015 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 PHF1O43189 567 aaPredicted RBP10.21□□□□□ -0.78
HDAC4-210ENST00000493582 TGOLN2O43493 480 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 NPIPB7O75200 414 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 NXPH3O95157 252 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 DMRTA1Q5VZB9 504 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 LIAT1Q6ZQX7 453 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 ARL6IP6Q8N6S5 226 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 DNASE2BQ8WZ79 361 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 MSI2Q96DH6 328 aaKnown RBP10.21□□□□□ -0.78
HDAC4-210ENST00000493582 GLRX2Q9NS18 164 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 GPR173Q9NS66 373 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 ZNF581Q9P0T4 197 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 SEMA5BQ9P283 1151 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 ANXA10Q9UJ72 324 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 GON4LQ3T8J9 2241 aa10.21□□□□□ -0.78
HDAC4-210ENST00000493582 SERPINE3A8MV23 424 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 HSPA12AO43301 675 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 SCGB1D1O95968 90 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 OPN1MWP04001 364 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 OPN1MW2P0DN77 364 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 OPN1MW3P0DN78 364 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 ELLP55199 621 aaPredicted RBP10.2□□□□□ -0.78
HDAC4-210ENST00000493582 ZNF121P58317 390 aaPredicted RBP10.2□□□□□ -0.78
HDAC4-210ENST00000493582 ERVS71-1P61550 626 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 DCAF10Q5QP82 559 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 DNM1P34Q6PK57 102 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 LGI3Q8N145 548 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 PRR18Q8N4B5 295 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 NOXO1Q8NFA2 376 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 NUDT22Q9BRQ3 303 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 SLC2A9Q9NRM0 540 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 TMEM242Q9NWH2 141 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 LRFN1Q9P244 771 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 LAMP3Q9UQV4 416 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 TOX3O15405 576 aaPredicted RBP10.2□□□□□ -0.78
HDAC4-210ENST00000493582 GZMHP20718 246 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 SLC6A8P48029 635 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 DYNLT3P51808 116 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 POLR2HP52434 150 aaKnown RBP10.2□□□□□ -0.78
HDAC4-210ENST00000493582 PPA1Q15181 289 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 ZNF705AQ6ZN79 300 aaPredicted RBP10.2□□□□□ -0.78
HDAC4-210ENST00000493582 OR8G5Q8NG78 346 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 ASB10Q8WXI3 467 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 KCNK17Q96T54 332 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 FAAP24Q9BTP7 215 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 SRD5A3Q9H8P0 318 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 SDF2L1Q9HCN8 221 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 MYOTQ9UBF9 498 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 POLR1DQ9Y2S0 133 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 A0A0J9YY10 115 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 LOC102723971A0A1B0GUV8 181 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 NKX2-6A6NCS4 301 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 SSSCA1O60232 199 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 CDAP32320 146 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 GNB2P62879 340 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 TLE1Q04724 770 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 BRICD5Q6PL45 260 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 CRIP3Q6Q6R5 217 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 TMEM252Q8N6L7 170 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 RBMXL1Q96E39 390 aaKnown RBP10.2□□□□□ -0.78
HDAC4-210ENST00000493582 CERS4Q9HA82 394 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 DECR2Q9NUI1 292 aa10.2□□□□□ -0.78
HDAC4-210ENST00000493582 RP1P56715 2156 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 E9PLN8 166 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 ECI1P42126 302 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 OR3A1P47881 315 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 GNG10P50151 68 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 IGLV3-21P80748 117 aaPredicted RBP10.19□□□□□ -0.78
HDAC4-210ENST00000493582 TLE4Q04727 773 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 FAM189A2Q15884 450 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 IQCJQ1A5X6 159 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 ZNF774Q6NX45 483 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 SLC25A26Q70HW3 274 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 FAM57BQ71RH2 274 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 OR4D5Q8NGN0 318 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 ADAMTS18Q8TE60 1221 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 RIMS4Q9H426 269 aaPredicted RBP10.19□□□□□ -0.78
HDAC4-210ENST00000493582 ZNF665Q9H7R5 613 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 VAX2Q9UIW0 290 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 IGHMP01871 453 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 PGCP20142 388 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 FGF8P55075 233 aaPredicted RBP10.19□□□□□ -0.78
HDAC4-210ENST00000493582 HSF1Q00613 529 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 HNF4GQ14541 408 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 CXorf66Q5JRM2 361 aaPredicted RBP10.19□□□□□ -0.78
HDAC4-210ENST00000493582 SLC38A9Q8NBW4 561 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 DYRK2Q92630 601 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 MMABQ96EY8 250 aaPredicted RBP10.19□□□□□ -0.78
HDAC4-210ENST00000493582 TP53RKQ96S44 253 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 TBL1XR1Q9BZK7 514 aa10.19□□□□□ -0.78
HDAC4-210ENST00000493582 ASCC3Q8N3C0 2202 aaKnown RBP10.19□□□□□ -0.78
HDAC4-210ENST00000493582 CHD3Q12873 2000 aaKnown RBP10.19□□□□□ -0.78
HDAC4-210ENST00000493582 A6NCN8 305 aa10.18□□□□□ -0.78
HDAC4-210ENST00000493582 C2orf72A6NCS6 295 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms