RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ZNF728P0DKX0 622 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 ATP6V0CP27449 155 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 GFERP55789 205 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 GABREP78334 506 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 SSX2Q16385 188 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 LIAT1Q6ZQX7 453 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 OR10AD1Q8NGE0 317 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 M1APQ8TC57 530 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 LIN37Q96GY3 246 aaPredicted RBP16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 SSX3Q99909 188 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 MRPL13Q9BYD1 178 aaKnown RBP16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 PLEKHJ1Q9NW61 149 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 AK3Q9UIJ7 227 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 ADAMTS9Q9P2N4 1935 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 MSTNO14793 375 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 RER1O15258 196 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 GLI4P10075 376 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 THEM4Q5T1C6 240 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 UBALD2Q8IYN6 164 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 ZNF283Q8N7M2 679 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 ABHD5Q8WTS1 349 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 DNASE2BQ8WZ79 361 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 BOD1Q96IK1 185 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 NIPSNAP3BQ9BS92 247 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 SUCNR1Q9BXA5 334 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 ZNF700Q9H0M5 742 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 SERINC1Q9NRX5 453 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 HSF4Q9ULV5 492 aa16.87■□□□□ 0.29
SNAPC3-206ENST00000490969 TERTO14746 1132 aaKnown RBP16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 GABRR1P24046 479 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 CSNK1A1P48729 337 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 ICAM4Q14773 271 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 SLC16A14Q7RTX9 510 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 FRZBQ92765 325 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 SOHLH2Q9NX45 425 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 PISDQ9UG56 409 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 MYO7BQ6PIF6 2116 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 ADAM10O14672 748 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 SCAF4O95104 1147 aaKnown RBP16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 ZNF205O95201 554 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 MFAP5Q13361 173 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 ZNF266Q14584 549 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 SLC25A45Q8N413 288 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 PACRGQ96M98 296 aaPredicted RBP16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 PNRC2Q9NPJ4 139 aaKnown RBP16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 WSB1Q9Y6I7 421 aa16.86■□□□□ 0.29
SNAPC3-206ENST00000490969 C2orf72A6NCS6 295 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 E9PLN8 166 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 PAX1P15863 534 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 SFTPDP35247 375 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 FASLGP48023 281 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 EFNA3P52797 238 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 CLRN1P58418 232 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 GNMTQ14749 295 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 PHLDA2Q53GA4 152 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 FBXL14Q8N1E6 418 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 C2orf88Q9BSF0 95 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 IER2Q9BTL4 223 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 VN1R1Q9GZP7 353 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 FOXD3Q9UJU5 478 aaPredicted RBP16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 NXT1Q9UKK6 140 aaKnown RBP16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 C5orf63A6NC05 138 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 ZNF850A8MQ14 1090 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 PIAS2O75928 621 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 HSPB1P04792 205 aaKnown RBP16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 SLC35E3Q7Z769 313 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 OR5L1Q8NGL2 311 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 OR14L1PQ8NHC6 308 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 ST8SIA1Q92185 356 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 MSI2Q96DH6 328 aaKnown RBP16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 SMOC1Q9H4F8 434 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 NECAP2Q9NVZ3 263 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 B3GAT1Q9P2W7 334 aa16.85■□□□□ 0.29
SNAPC3-206ENST00000490969 LMO7DNF2Z398 122 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 H3BML4 177 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 FCGR2AP12318 317 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 FXYD4P59646 89 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 EIF3IQ13347 325 aaKnown RBP16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 LBHQ53QV2 105 aaPredicted RBP16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 ZNF506Q5JVG8 444 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 LGI3Q8N145 548 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 OR2C3Q8N628 320 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 OR5R1Q8NH85 324 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 MISP3Q96FF7 219 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 FAM210BQ96KR6 192 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 PCED1AQ9H1Q7 454 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 COPS7AQ9UBW8 275 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 FAM230AA0A1W2PPH8 454 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 FAM24AA6NFZ4 105 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 LIPT2A6NK58 231 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 RRADP55042 308 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 SPCS3P61009 180 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 SLC22A25Q6T423 547 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 C17orf82Q86X59 251 aaPredicted RBP16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 NOXO1Q8NFA2 376 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 OR4D5Q8NGN0 318 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 DDIT4LQ96D03 193 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 SLC25A31Q9H0C2 315 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 DUSP15Q9H1R2 295 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms