RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 GABRR1P24046 479 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 PEX2P28328 305 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 DAPP51397 102 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 FUT6P51993 359 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 KRTAP10-11P60412 298 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 SLC35A2P78381 396 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 IL18R1Q13478 541 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 AADACL4Q5VUY2 407 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 FAHD1Q6P587 224 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 ZBTB49Q6ZSB9 765 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 SSX6Q7RTT6 188 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 C16orf82Q7Z2V1 217 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 DNAJC9Q8WXX5 260 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 MYDGFQ969H8 173 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 LIN7BQ9HAP6 207 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 H2AFY2Q9P0M6 372 aaPredicted RBP12.68□□□□□ -0.38
PLOD3-216ENST00000489927 TSSC4Q9Y5U2 329 aaPredicted RBP12.68□□□□□ -0.38
PLOD3-216ENST00000489927 DSCAML1Q8TD84 2053 aa12.68□□□□□ -0.38
PLOD3-216ENST00000489927 LPLP06858 475 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 DUSP1P28562 367 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 NPBWR2P48146 333 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 EFNB1P98172 346 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 ZNF91Q05481 1191 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 ABCA11PQ4W5N1 156 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 SLX4IPQ5VYV7 408 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 NXNL2Q5VZ03 156 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 C10orf99Q6UWK7 81 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 BAIAP2L2Q6UXY1 529 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 TRAPPC6BQ86SZ2 158 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 SPATA24Q86W54 205 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 CATSPERDQ86XM0 798 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 TCEANCQ8N8B7 351 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 YIPF7Q8N8F6 280 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 BORCS8Q96FH0 119 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 RCC1LQ96I51 464 aaKnown RBP12.67□□□□□ -0.38
PLOD3-216ENST00000489927 AKR1E2Q96JD6 320 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 TBX5Q99593 518 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 PRRG3Q9BZD7 231 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 CHST5Q9GZS9 411 aa12.67□□□□□ -0.38
PLOD3-216ENST00000489927 SEBOXQ9HB31 216 aaPredicted RBP12.67□□□□□ -0.38
PLOD3-216ENST00000489927 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.67□□□□□ -0.38
PLOD3-216ENST00000489927 RBFOX1Q9NWB1 397 aaKnown RBP12.67□□□□□ -0.38
PLOD3-216ENST00000489927 WI2-2373I1.2A0A1W2PRP0 233 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 GATBO75879 557 aaKnown RBP12.66□□□□□ -0.38
PLOD3-216ENST00000489927 KRT8P05787 483 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 CALCBP10092 127 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 EPHA2P29317 976 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 OR3A1P47881 315 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 FLOT2Q14254 428 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 DEFB121Q5J5C9 76 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 PRAMEF5Q5TYX0 476 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 Q8IYB0 196 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 ENTHD1Q8IYW4 607 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 ABHD12Q8N2K0 398 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 OR4X2Q8NGF9 303 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 TMEM163Q8TC26 289 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 CAPSLQ8WWF8 208 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 STMN2Q93045 179 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 NRBF2Q96F24 287 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 SLC25A33Q9BSK2 321 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 INPP5EQ9NRR6 644 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.66□□□□□ -0.38
PLOD3-216ENST00000489927 DPM3Q9P2X0 92 aa12.66□□□□□ -0.38
PLOD3-216ENST00000489927 UBE2J1Q9Y385 318 aaPredicted RBP12.66□□□□□ -0.38
PLOD3-216ENST00000489927 SH2D7A6NKC9 451 aaPredicted RBP12.65□□□□□ -0.38
PLOD3-216ENST00000489927 MGST3O14880 152 aa12.65□□□□□ -0.38
PLOD3-216ENST00000489927 MITFO75030 526 aaPredicted RBP12.65□□□□□ -0.38
PLOD3-216ENST00000489927 SERPINA3P01011 423 aa12.65□□□□□ -0.38
PLOD3-216ENST00000489927 AMY1AP04745 511 aa12.65□□□□□ -0.38
PLOD3-216ENST00000489927 AMY2AP04746 511 aa12.65□□□□□ -0.38
PLOD3-216ENST00000489927 BCL3P20749 454 aa12.65□□□□□ -0.38
PLOD3-216ENST00000489927 BRS3P32247 399 aa12.65□□□□□ -0.38
PLOD3-216ENST00000489927 SNU13P55769 128 aaKnown RBP12.65□□□□□ -0.38
PLOD3-216ENST00000489927 P2RX3P56373 397 aa12.65□□□□□ -0.38
PLOD3-216ENST00000489927 BDH1Q02338 343 aa12.65□□□□□ -0.38
PLOD3-216ENST00000489927 KHDC1LQ5JSQ8 128 aa12.65□□□□□ -0.38
PLOD3-216ENST00000489927 FAM58AQ8N1B3 248 aa12.65□□□□□ -0.38
PLOD3-216ENST00000489927 PRSS35Q8N3Z0 413 aa12.65□□□□□ -0.38
PLOD3-216ENST00000489927 BCAS4Q8TDM0 211 aa12.65□□□□□ -0.38
PLOD3-216ENST00000489927 IL4I1Q96RQ9 567 aa12.65□□□□□ -0.38
PLOD3-216ENST00000489927 TRBV2A0A0J9YWF9 115 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 A0A1W2PQL4 384 aaPredicted RBP12.64□□□□□ -0.39
PLOD3-216ENST00000489927 TCRBV3S1A0A5B6 114 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 FAM172BPA6NC97 362 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 SIRPB1O00241 398 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 ENTPD6O75354 484 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 OR2F2O95006 317 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 DUS4LO95620 317 aaKnown RBP12.64□□□□□ -0.39
PLOD3-216ENST00000489927 IGLV1-47P01700 117 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 PRKACAP17612 351 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 CDK2P24941 298 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 ERP29P30040 261 aaKnown RBP12.64□□□□□ -0.39
PLOD3-216ENST00000489927 HOXD3P31249 432 aaPredicted RBP12.64□□□□□ -0.39
PLOD3-216ENST00000489927 RBP2P50120 134 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 EGFEM1PQ0D2K5 195 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 ZNF146Q15072 292 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 C12orf73Q69YU5 71 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 RTN4RL2Q86UN3 420 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 GID4Q8IVV7 300 aa12.64□□□□□ -0.39
PLOD3-216ENST00000489927 ZNF596Q8TC21 504 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms