RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-206	ENST00000489853	TDRG1	Q3Y452	100 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	WDR38	Q5JTN6	314 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	FAM78A	Q5JUQ0	283 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	AGBL4	Q5VU57	503 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ASPHD2	Q6ICH7	369 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LCN10	Q6JVE6	187 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MFSD12	Q6NUT3	480 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	VWA1	Q6PCB0	445 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853		Q6ZS46	218 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF765	Q7L2R6	523 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	NUP54	Q7Z3B4	507 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LYPD6	Q86Y78	171 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	D2HGDH	Q8N465	521 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LINC01555	Q8NAE3	123 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZFP62	Q8NB50	900 aa	Predicted RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SLC16A11	Q8NCK7	471 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR4B1	Q8NGF8	309 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR4D6	Q8NGJ1	314 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR10S1	Q8NGN2	331 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR5H2	Q8NGV7	314 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CTHRC1	Q96CG8	243 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SDF2	Q99470	211 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LPAR4	Q99677	370 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ABHD6	Q9BV23	337 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF701	Q9NV72	531 aa	Predicted RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	BET1L	Q9NYM9	111 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	NAT8	Q9UHE5	227 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	AK3	Q9UIJ7	227 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CES1P1	Q9UKY3	287 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	C14orf166	Q9Y224	244 aa	Known RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	B3GALT5	Q9Y2C3	310 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RNF115	Q9Y4L5	304 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	NSG1	A0A0A6YYJ2	146 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853		A0A1B0GWA3	101 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MED19	A0JLT2	244 aa	Predicted RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SYNDIG1L	A6NDD5	238 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	GLOD5	A6NK44	160 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF732	B4DXR9	585 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853		M0QZ24	198 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	FGF17	O60258	216 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TBL1X	O60907	577 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LDB3	O75112	727 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	STC2	O76061	302 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR6A2	O95222	327 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PI3	P19957	117 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TNFSF4	P23510	183 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ATP6V0C	P27449	155 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	S100A7	P31151	101 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PTGER1	P34995	402 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SFTPD	P35247	375 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SRP14	P37108	136 aa	Known RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CDKN2A	P42771	156 aa	Known RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	GALR1	P47211	349 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	DNASE1L1	P49184	302 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MTCP1	P56278	107 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CLDN2	P57739	230 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SNRPD1	P62314	119 aa	Known RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RPL11	P62913	178 aa	Known RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LCN2	P80188	198 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	QRFP	P83859	136 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	DUSP2	Q05923	314 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SLC17A1	Q14916	467 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MPV17L	Q2QL34	196 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF658B	Q4V348	819 aa	Predicted RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TMEM41B	Q5BJD5	291 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	C9orf50	Q5SZB4	431 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MRPL2	Q5T653	305 aa	Known RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	FCRL6	Q6DN72	434 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RTL6	Q6ICC9	239 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SLC8B1	Q6J4K2	584 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SLC48A1	Q6P1K1	146 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PRSS57	Q6UWY2	283 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	C16orf82	Q7Z2V1	217 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR4D5	Q8NGN0	318 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR2AJ1	Q8NGZ0	328 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	OR2T10	Q8NGZ9	312 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	WFDC12	Q8WWY7	111 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	SCAMP4	Q969E2	229 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TMEM56	Q96MV1	263 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	RASL10B	Q96S79	203 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	GPX7	Q96SL4	187 aa	Predicted RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	AGMAT	Q9BSE5	352 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ABHD14A	Q9BUJ0	271 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TAS2R4	Q9NYW5	299 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MRPL27	Q9P0M9	148 aa	Known RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PRSS50	Q9UI38	385 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	CDC42EP3	Q9UKI2	254 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TBX21	Q9UL17	535 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PADI3	Q9ULW8	664 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	MRPS16	Q9Y3D3	137 aa	Known RBP	4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	PAM16	Q9Y3D7	125 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ZNF780B	Q9Y6R6	833 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	TMEM56-RWDD3	S4R434	201 aa		4.17	□□□□□ -1.74
SNRNP40-206	ENST00000489853	UNC80	Q8N2C7	3258 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853	ADM5	C9JUS6	153 aa		4.16	□□□□□ -1.74
SNRNP40-206	ENST00000489853		H7BYZ3	331 aa		4.16	□□□□□ -1.74

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