RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 KRTAP21-3Q3LHN1 58 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 NHLRC3Q5JS37 347 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 C1orf122Q6ZSJ8 110 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 CMTM4Q8IZR5 234 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 SPARTQ8N0X7 666 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 CHST4Q8NCG5 386 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 TMEM185AQ8NFB2 350 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 OR5D18Q8NGL1 313 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 OR5D13Q8NGL4 314 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 TNFAIP8L1Q8WVP5 186 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 RFT1Q96AA3 541 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 UPRTQ96BW1 309 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 FOXRED1Q96CU9 486 aaPredicted RBP9.17□□□□□ -0.94
CPSF7-212ENST00000489728 SPACA5Q96QH8 159 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 UQCC2Q9BRT2 126 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 TMED9Q9BVK6 235 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 SLITRK2Q9H156 845 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 TCF7L1Q9HCS4 588 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 NOX4Q9NPH5 578 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 RBFOX1Q9NWB1 397 aaKnown RBP9.17□□□□□ -0.94
CPSF7-212ENST00000489728 NDUFB11Q9NX14 153 aa9.17□□□□□ -0.94
CPSF7-212ENST00000489728 ANK3Q12955 4377 aaKnown RBP9.16□□□□□ -0.94
CPSF7-212ENST00000489728 A0A1B0GW55 424 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 A0A1W2PPH5 198 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 F8VVB4 439 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 F8VWA3 439 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 K7N7A8 449 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 SH2D1BO14796 132 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 PIN1P1O15428 100 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 ANGPTL7O43827 346 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 ZNF737O75373 536 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 TNFAIP8O95379 198 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 HAND1O96004 215 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 TK1P04183 234 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 DUX4L2P0CJ85 424 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 DUX4L3P0CJ86 424 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 DUX4L4P0CJ87 422 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 DUX4L5P0CJ88 424 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 DUX4L6P0CJ89 424 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 DUX4L7P0CJ90 424 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 RANBP1P43487 201 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 IL13RA2Q14627 380 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 RSU1Q15404 277 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 HSD17B12Q53GQ0 312 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 ARMCX4Q5H9R4 360 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 METTL11BQ5VVY1 283 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 CD200R1LQ6Q8B3 271 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 DUX4L9Q6RFH8 374 aaPredicted RBP9.16□□□□□ -0.94
CPSF7-212ENST00000489728 C1orf229Q6ZS94 237 aaPredicted RBP9.16□□□□□ -0.94
CPSF7-212ENST00000489728 LINC00596Q86U02 117 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 SATL1Q86VE3 508 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 OR8H2Q8N162 312 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 ZNRF1Q8ND25 227 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 OR51T1Q8NGJ9 327 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 PPP1R35Q8TAP8 253 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 MRPS24Q96EL2 167 aaKnown RBP9.16□□□□□ -0.94
CPSF7-212ENST00000489728 SNX22Q96L94 193 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 S100A13Q99584 98 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 METTL9Q9H1A3 318 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 CNTD2Q9H8S5 307 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 GHRLQ9UBU3 117 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 DUX4Q9UBX2 424 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 OR14J1Q9UGF5 321 aa9.16□□□□□ -0.94
CPSF7-212ENST00000489728 SF3B6Q9Y3B4 125 aaKnown RBP9.16□□□□□ -0.94
CPSF7-212ENST00000489728 WNK2Q9Y3S1 2297 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 A0A0A6YYJ9 748 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 M0R1W7 72 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 CCRL2O00421 344 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 AVPP01185 164 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 CSN2P05814 226 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 SFTPBP07988 381 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 CD37P11049 281 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 SELLP14151 372 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 NDUFB7P17568 137 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 LMO1P25800 156 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 OR3A4PP47883 348 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 CAPZA1P52907 286 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 COL10A1Q03692 680 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 MEF2CQ06413 473 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-212ENST00000489728 PDCD1Q15116 288 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 METAP1DQ6UB28 335 aaPredicted RBP9.15□□□□□ -0.94
CPSF7-212ENST00000489728 C9orf139Q6ZV77 190 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 RNF144BQ7Z419 303 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 CEACAM19Q7Z692 300 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 LYPD6Q86Y78 171 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 ASCC1Q8N9N2 400 aaKnown RBP9.15□□□□□ -0.94
CPSF7-212ENST00000489728 H1FXQ92522 213 aaKnown RBP9.15□□□□□ -0.94
CPSF7-212ENST00000489728 WDFY2Q96P53 400 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 FAM192AQ9GZU8 254 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 SIRPDQ9H106 197 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 IFT22Q9H7X7 185 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 UNKLQ9H9P5 680 aaKnown RBP9.15□□□□□ -0.94
CPSF7-212ENST00000489728 EXOSC4Q9NPD3 245 aaKnown RBP9.15□□□□□ -0.94
CPSF7-212ENST00000489728 METRNQ9UJH8 293 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 NUP50Q9UKX7 468 aa9.15□□□□□ -0.94
CPSF7-212ENST00000489728 MXRA5Q9NR99 2828 aa9.14□□□□□ -0.95
CPSF7-212ENST00000489728 ZFHX3Q15911 3703 aa9.14□□□□□ -0.95
CPSF7-212ENST00000489728 FUOMA2VDF0 154 aa9.14□□□□□ -0.95
CPSF7-212ENST00000489728 MGST3O14880 152 aa9.14□□□□□ -0.95
CPSF7-212ENST00000489728 TOX4O94842 621 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms