RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 KDM4BO94953 1096 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 MGMTP16455 207 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 SCAND1P57086 179 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 DSCR9P59020 149 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 GPR176Q14439 515 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 MICBQ29980 383 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 OR5T2Q8NGG2 359 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 C10orf105Q8TEF2 133 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 EMG1Q92979 244 aaKnown RBP11.95□□□□□ -0.5
CLDN11-209ENST00000489485 FOXC2Q99958 501 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 TMEM59Q9BXS4 323 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 SELENOIQ9C0D9 397 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 BPESC1Q9GZL8 116 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 AKIP1Q9NQ31 210 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 ETV7Q9Y603 341 aa11.95□□□□□ -0.5
CLDN11-209ENST00000489485 OOEPA6NGQ2 149 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.94□□□□□ -0.5
CLDN11-209ENST00000489485 NDUFS8O00217 210 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 EIF4EP06730 217 aaKnown RBP11.94□□□□□ -0.5
CLDN11-209ENST00000489485 ACAA1P09110 424 aaPredicted RBP11.94□□□□□ -0.5
CLDN11-209ENST00000489485 GTF2F2P13984 249 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 ELK1P19419 428 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 GIFP27352 417 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 S100A5P33763 92 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 SNU13P55769 128 aaKnown RBP11.94□□□□□ -0.5
CLDN11-209ENST00000489485 ERVK11-1P61568 191 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 ZMYND11Q15326 602 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 SMIM21Q3B7S5 101 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 Q8IYB0 196 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 DTX3Q8N9I9 347 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 SLC25A38Q96DW6 304 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 MIXL1Q9H2W2 232 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 NARFLQ9H6Q4 476 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 IL36GQ9NZH8 169 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 IL36RNQ9UBH0 155 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 PEX16Q9Y5Y5 336 aa11.94□□□□□ -0.5
CLDN11-209ENST00000489485 IGHV4-30-2A0A087WSY4 118 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 TRAV38-1A0A0B4J264 116 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 PRKACAP17612 351 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 MADCAM1Q13477 382 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 PIGYQ3MUY2 71 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 UBE2NLQ5JXB2 153 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 PRSS57Q6UWY2 283 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 ACP7Q6ZNF0 438 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 DNM1P46Q6ZS02 220 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 OR2W3Q7Z3T1 314 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 BIVMQ86UB2 503 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 FAM58AQ8N1B3 248 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 OSR2Q8N2R0 312 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 OR6Q1Q8NGQ2 317 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 NICN1Q9BSH3 213 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 ATG5Q9H1Y0 275 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 PCDHB16Q9NRJ7 776 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 RASL12Q9NYN1 266 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 RAB22AQ9UL26 194 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 ST3GAL6Q9Y274 331 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 TEX15Q9BXT5 2789 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 FAM25AB3EWG3 89 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 FAM25CB3EWG5 89 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 FAM25GB3EWG6 89 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 LGALS8O00214 317 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 APOA1P02647 267 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 MUC1P15941 1255 aaPredicted RBP11.93□□□□□ -0.5
CLDN11-209ENST00000489485 TNFSF8P32971 234 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 MDH2P40926 338 aaKnown RBP11.93□□□□□ -0.5
CLDN11-209ENST00000489485 SHEQ5VZ18 495 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 ELP2Q6IA86 826 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 FAM90A1Q86YD7 464 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 CMTM4Q8IZR5 234 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 OR51T1Q8NGJ9 327 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 PTX4Q96A99 478 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 Q96MF0 132 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 TMEM165Q9HC07 324 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 HES4Q9HCC6 221 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 NLKQ9UBE8 527 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 FBLN5Q9UBX5 448 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 OR14J1Q9UGF5 321 aa11.93□□□□□ -0.5
CLDN11-209ENST00000489485 ITPR3Q14573 2671 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 OR2AT4A6NND4 320 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 GEMIN2O14893 280 aaKnown RBP11.92□□□□□ -0.5
CLDN11-209ENST00000489485 IGHV2-70P01814 119 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 GYPAP02724 150 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 RAB6AP20340 208 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 GABRR1P24046 479 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 DUSP1P28562 367 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 VEGFCP49767 419 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 FGF12P61328 243 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 RPS27AP62979 156 aaKnown RBP11.92□□□□□ -0.5
CLDN11-209ENST00000489485 OXA1LQ15070 435 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 PDCD1Q15116 288 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 TAF9Q16594 264 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 TEX36Q5VZQ5 186 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 FIP1L1Q6UN15 594 aaKnown RBP11.92□□□□□ -0.5
CLDN11-209ENST00000489485 LRRC28Q86X40 367 aaPredicted RBP11.92□□□□□ -0.5
CLDN11-209ENST00000489485 ZBTB8BQ8NAP8 495 aaPredicted RBP11.92□□□□□ -0.5
CLDN11-209ENST00000489485 Q8NFD4 153 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 S100A16Q96FQ6 103 aaKnown RBP11.92□□□□□ -0.5
CLDN11-209ENST00000489485 DIRAS2Q96HU8 199 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 LPAR5Q9H1C0 372 aa11.92□□□□□ -0.5
CLDN11-209ENST00000489485 RHOFQ9HBH0 211 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms