RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 TNFAIP6P98066 277 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 ZNF85Q03923 595 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 MRPL28Q13084 256 aaKnown RBP6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 TNK1Q13470 666 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 TSTQ16762 297 aaKnown RBP6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 LIPNQ5VXI9 398 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 LHFPL3Q86UP9 236 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 EGFL6Q8IUX8 553 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 CROCCP3Q8IVE0 287 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 ZCCHC24Q8N2G6 241 aaKnown RBP6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 RFLNBQ8N5W9 214 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 SPERTQ8NA61 448 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 MAPK1IP1LQ8NDC0 245 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 BHLHE23Q8NDY6 225 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 OR2Z1Q8NG97 314 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 OR8B12Q8NGG6 310 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 OR52N1Q8NH53 320 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 RDH5Q92781 318 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 ELMOD3Q96FG2 381 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 PBOV1Q9GZY1 135 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 PEMTQ9UBM1 199 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 NUFIP1Q9UHK0 495 aaKnown RBP6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 MRM2Q9UI43 246 aaKnown RBP6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 OR52A1Q9UKL2 312 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 LSM2Q9Y333 95 aaKnown RBP6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 PLCE1Q9P212 2302 aa6.76□□□□□ -1.33
TRAPPC12-221ENST00000489032 A0A0A0MQY5 61 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 A0A0G2JK05 382 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 LOC390937A0A1W2PQ73 354 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 DNAJC9-AS1A6NH13 148 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 FAM157AC9JC47 383 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 J3QLW9 94 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 J3QRE1 110 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 NDUFS8O00217 210 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 MAGEB4O15481 346 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 NDUFS7O75251 213 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 IGHV1-46P01743 117 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 ZNF12P17014 697 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 ZNF19P17023 458 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 GADD45AP24522 165 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 SOX6P35712 828 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 GPR12P47775 334 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 SRP9P49458 86 aaKnown RBP6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 ETV1P50549 477 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 MMP15P51511 669 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 GBX2P52951 348 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 VBP1P61758 197 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 CCL8P80075 99 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 MRPS11P82912 194 aaKnown RBP6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 SLC3A1Q07837 685 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 ACSM1Q08AH1 577 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 DCTN2Q13561 401 aaKnown RBP6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 KLF9Q13886 244 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 SPCS2Q15005 226 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 OR8G1Q15617 311 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 HFEQ30201 348 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 CDONQ4KMG0 1287 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 TP53I3Q53FA7 332 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 SSX6Q7RTT6 188 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 ZNF575Q86XF7 245 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 SYS1Q8N2H4 156 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 CCDC54Q8NEL0 328 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 OR56B2PQ8NGI1 322 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 S100ZQ8WXG8 99 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 UFD1Q92890 307 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 SGK3Q96BR1 496 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 C4orf36Q96KX1 117 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 OPALINQ96PE5 141 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 OR5M11Q96RB7 305 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 SLC30A2Q9BRI3 323 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 DCSTAMPQ9H295 470 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 PLGRKTQ9HBL7 147 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 ABCB9Q9NP78 766 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 NDUFB11Q9NX14 153 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 FAM206AQ9NX38 181 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 MRPL15Q9P015 296 aaKnown RBP6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 IL19Q9UHD0 177 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 STUB1Q9UNE7 303 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 SSR3Q9UNL2 185 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 CAB39Q9Y376 341 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 A3GALT2U3KPV4 340 aa6.75□□□□□ -1.33
TRAPPC12-221ENST00000489032 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.75□□□□□ -1.332e-12■■■■■ 27.6
TRAPPC12-221ENST00000489032 ARFGEF3Q5TH69 2177 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 IGHV1-69-2A0A0G2JMI3 117 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 LOC100506127A0A0U1RQW1 187 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 hCG_38984A0A1B0GV85 526 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 A0A1B0GVI7 797 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 ZSCAN5BA6NJL1 495 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 ANXA2P2A6NMY6 339 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 PRR32B1ATL7 298 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 IFNL4K9M1U5 179 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 GMDSO60547 372 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 DHRS3O75911 302 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 NDUFB8O95169 186 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 CD55P08174 381 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 UBCP0CG48 685 aaKnown RBP6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 IRF2P14316 349 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 SLC25A16P16260 332 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 ACHEP22303 614 aa6.74□□□□□ -1.33
TRAPPC12-221ENST00000489032 CA6P23280 308 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms