RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 IL17RELQ6ZVW7 336 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 LYPD6Q86Y78 171 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 ZSCAN4Q8NAM6 433 aaPredicted RBP9.17□□□□□ -0.94
UBE4B-210ENST00000488228 ZNRF1Q8ND25 227 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 PXT1Q8NFP0 134 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 SDSLQ96GA7 329 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 CHCHD6Q9BRQ6 235 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 DNTTIP1Q9H147 329 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 SLITRK2Q9H156 845 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 OR51E2Q9H255 320 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 HMG20AQ9NP66 347 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 KAAG1Q9UBP8 84 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 ING4Q9UNL4 249 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 GSTK1Q9Y2Q3 226 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 MAB21L2Q9Y586 359 aa9.17□□□□□ -0.94
UBE4B-210ENST00000488228 NIPBLQ6KC79 2804 aaeCLIP9.17□□□□□ -0.94
UBE4B-210ENST00000488228 KIAA2026Q5HYC2 2103 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 A0A0G2JMP0 313 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 LOC100506127A0A0U1RQW1 187 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 A0A0X1KG70 313 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 SMIM30A4D0T7 59 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 SIRPB1O00241 398 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 NDUFB3O43676 98 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 HTR3BO95264 441 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 CD36P16671 472 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 NDUFB7P17568 137 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 PRDX2P32119 198 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 PAX2Q02962 417 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 COL10A1Q03692 680 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 CR1LQ2VPA4 569 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 PIGYQ3MUY2 71 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 SLC22A6Q4U2R8 563 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 LRRC10Q5BKY1 277 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 DCAF12L2Q5VW00 463 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 GLIPR1L1Q6UWM5 242 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 ASCC1Q8N9N2 400 aaKnown RBP9.16□□□□□ -0.94
UBE4B-210ENST00000488228 OR4M2Q8NGB6 313 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 H1FXQ92522 213 aaKnown RBP9.16□□□□□ -0.94
UBE4B-210ENST00000488228 DACT3Q96B18 629 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-210ENST00000488228 C1orf147Q96MC9 270 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-210ENST00000488228 TXNL4BQ9NX01 149 aaKnown RBP9.16□□□□□ -0.94
UBE4B-210ENST00000488228 ZNF581Q9P0T4 197 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 SLC25A10Q9UBX3 287 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-210ENST00000488228 AK6Q9Y3D8 172 aaKnown RBP9.16□□□□□ -0.94
UBE4B-210ENST00000488228 MXRA5Q9NR99 2828 aa9.16□□□□□ -0.94
UBE4B-210ENST00000488228 LOC105371242A0A075B767 164 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 IGHV2-70DA0A0C4DH43 119 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 TMEM82A0PJX8 343 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 ZNF737O75373 536 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 JUNBP17275 347 aaPredicted RBP9.15□□□□□ -0.94
UBE4B-210ENST00000488228 CPT2P23786 658 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 MYL9P24844 172 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 MTNR1BP49286 362 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 NPY4RP50391 375 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 OR10A3P58181 314 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 FGF12P61328 243 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 PDCD1Q15116 288 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 P2RY14Q15391 338 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 SPIN3Q5JUX0 258 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 GLT8D1Q68CQ7 371 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 ELP2Q6IA86 826 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 FAHD2BQ6P2I3 314 aaPredicted RBP9.15□□□□□ -0.94
UBE4B-210ENST00000488228 METAP1DQ6UB28 335 aaPredicted RBP9.15□□□□□ -0.94
UBE4B-210ENST00000488228 ASCL4Q6XD76 172 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 BTN2A1Q7KYR7 527 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 FAM46BQ96A09 425 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 YIPF6Q96EC8 236 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 FAHD2AQ96GK7 314 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 MED30Q96HR3 178 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 S100A13Q99584 98 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 NUDT16L1Q9BRJ7 211 aaKnown RBP9.15□□□□□ -0.94
UBE4B-210ENST00000488228 UQCC2Q9BRT2 126 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 MRPS26Q9BYN8 205 aaKnown RBP9.15□□□□□ -0.94
UBE4B-210ENST00000488228 CHST6Q9GZX3 395 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 METTL9Q9H1A3 318 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 RNF167Q9H6Y7 350 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 IL36GQ9NZH8 169 aa9.15□□□□□ -0.94
UBE4B-210ENST00000488228 POLR3KQ9Y2Y1 108 aaPredicted RBP9.15□□□□□ -0.94
UBE4B-210ENST00000488228 C2CD3Q4AC94 2353 aa9.15□□□□□ -0.95
UBE4B-210ENST00000488228 MEX3AA1L020 520 aaKnown RBP9.14□□□□□ -0.95
UBE4B-210ENST00000488228 MEGF11A6BM72 1044 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 HSPB6O14558 160 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 ENSAO43768 121 aaKnown RBP9.14□□□□□ -0.95
UBE4B-210ENST00000488228 OR2H2O95918 312 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 AVPP01185 164 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 ZNF44P15621 663 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 GABRR1P24046 479 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 RBM11P57052 281 aaKnown RBP9.14□□□□□ -0.95
UBE4B-210ENST00000488228 SCN1BQ07699 218 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 EDDM3AQ14507 147 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 ZNF146Q15072 292 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 FAM120AOSQ5T036 256 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 OR10K2Q6IF99 312 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 CDH26Q8IXH8 852 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 ZNF561Q8N587 486 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 TMEM104Q8NE00 496 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 OR6M1Q8NGM8 313 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 TBC1D15Q8TC07 691 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 CENPOQ9BU64 300 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 TMPRSS13Q9BYE2 586 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms