RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 BLKP51451 505 aa12.38□□□□□ -0.43
COL16A1-214ENST00000488128 CCR5P51681 352 aa12.38□□□□□ -0.43
COL16A1-214ENST00000488128 CASP6P55212 293 aa12.38□□□□□ -0.43
COL16A1-214ENST00000488128 UCP2P55851 309 aa12.38□□□□□ -0.43
COL16A1-214ENST00000488128 HNF4GQ14541 408 aa12.38□□□□□ -0.43
COL16A1-214ENST00000488128 NKAIN1Q4KMZ8 207 aa12.38□□□□□ -0.43
COL16A1-214ENST00000488128 ZNF880Q6PDB4 577 aa12.38□□□□□ -0.43
COL16A1-214ENST00000488128 FIP1L1Q6UN15 594 aaKnown RBP12.38□□□□□ -0.43
COL16A1-214ENST00000488128 LYZL4Q96KX0 146 aa12.38□□□□□ -0.43
COL16A1-214ENST00000488128 SSX3Q99909 188 aa12.38□□□□□ -0.43
COL16A1-214ENST00000488128 ATG101Q9BSB4 218 aa12.38□□□□□ -0.43
COL16A1-214ENST00000488128 ARV1Q9H2C2 271 aa12.38□□□□□ -0.43
COL16A1-214ENST00000488128 CUTCQ9NTM9 273 aa12.38□□□□□ -0.43
COL16A1-214ENST00000488128 ANXA10Q9UJ72 324 aa12.38□□□□□ -0.43
COL16A1-214ENST00000488128 ST8SIA3O43173 380 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 EWSR1Q01844 656 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL16A1-214ENST00000488128 TMEM187Q14656 261 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 COL19A1Q14993 1142 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 COMMD1Q8N668 190 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 TMEM171Q8WVE6 324 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 B3GAT1Q9P2W7 334 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 HSF4Q9ULV5 492 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 FAM230AA0A1W2PPH8 454 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 SCAF4O95104 1147 aaKnown RBP12.37□□□□□ -0.43
COL16A1-214ENST00000488128 CTSDP07339 412 aaPredicted RBP12.37□□□□□ -0.43
COL16A1-214ENST00000488128 MMP9P14780 707 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 SSX2Q16385 188 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 AKR1C8PQ5T2L2 129 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 ZNF385CQ66K41 422 aaPredicted RBP12.37□□□□□ -0.43
COL16A1-214ENST00000488128 SPSB3Q6PJ21 355 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 FAM89BQ8N5H3 189 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 SLC35G3Q8N808 338 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 OR10AD1Q8NGE0 317 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 SLC2A9Q9NRM0 540 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 PISDQ9UG56 409 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 PIGLQ9Y2B2 252 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 WSB1Q9Y6I7 421 aa12.37□□□□□ -0.43
COL16A1-214ENST00000488128 SSSCA1O60232 199 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 MYBPHQ13203 477 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 TGIF2LXQ8IUE1 241 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 SLC38A9Q8NBW4 561 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 OR2AE1Q8NHA4 323 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 PACRGQ96M98 296 aaPredicted RBP12.36□□□□□ -0.43
COL16A1-214ENST00000488128 NUDT16L1Q9BRJ7 211 aaKnown RBP12.36□□□□□ -0.43
COL16A1-214ENST00000488128 NAA60Q9H7X0 242 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 GPR173Q9NS66 373 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 LRP4O75096 1905 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 IGSF23A1L1A6 192 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 H3BP45 60 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 SRP19P09132 144 aaKnown RBP12.36□□□□□ -0.43
COL16A1-214ENST00000488128 MYF5P13349 255 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 EPHA1P21709 976 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 HIKESHIQ53FT3 197 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 NIPSNAP3BQ9BS92 247 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 FER1L5A0AVI2 2057 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 A0A087WZY1 265 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 NKX2-6A6NCS4 301 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 ZNF705GA8MUZ8 300 aaPredicted RBP12.36□□□□□ -0.43
COL16A1-214ENST00000488128 TSTD3H0UI37 97 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 SLC31A2O15432 143 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 PNLIPP16233 465 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 ZNF43P17038 809 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 RAB11AP62491 216 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 SMAD4Q13485 552 aaKnown RBP12.36□□□□□ -0.43
COL16A1-214ENST00000488128 GNMTQ14749 295 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 CXorf66Q5JRM2 361 aaPredicted RBP12.36□□□□□ -0.43
COL16A1-214ENST00000488128 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.36□□□□□ -0.43
COL16A1-214ENST00000488128 OR5C1Q8NGR4 320 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 TP53RKQ96S44 253 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 PPP4R1LQ9P1A2 415 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 KLHL13Q9P2N7 655 aa12.36□□□□□ -0.43
COL16A1-214ENST00000488128 TLCD2A6NGC4 264 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 ZFP92A6NM28 416 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 SERPINE3A8MV23 424 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 RPL23AP62750 156 aaKnown RBP12.35□□□□□ -0.43
COL16A1-214ENST00000488128 SLC22A25Q6T423 547 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 REC114Q7Z4M0 266 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 TSTD1Q8NFU3 115 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 HAS2Q92819 552 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 ZNF160Q9HCG1 818 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 GPR27Q9NS67 375 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 GNG13Q9P2W3 67 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 FOXD3Q9UJU5 478 aaPredicted RBP12.35□□□□□ -0.43
COL16A1-214ENST00000488128 STRAPQ9Y3F4 350 aaKnown RBP12.35□□□□□ -0.43
COL16A1-214ENST00000488128 VSTM2BA6NLU5 285 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 C10orf142B7Z368 130 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 FUT3P21217 361 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 DUSP1P28562 367 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 IL2RGP31785 369 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 APLNRP35414 380 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 MTCP1P56278 107 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 UEVLDQ8IX04 471 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 ABCA7Q8IZY2 2146 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 OR2C3Q8N628 320 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 NECAP1Q8NC96 275 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 TMEM234Q8WY98 164 aa12.35□□□□□ -0.43
COL16A1-214ENST00000488128 LIPT2A6NK58 231 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 G0S2P27469 103 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 ICAM4Q14773 271 aa12.34□□□□□ -0.43
COL16A1-214ENST00000488128 MPV17LQ2QL34 196 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms