RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	SSX2	Q16385	188 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	MEDAG	Q5VYS4	303 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	CRIP3	Q6Q6R5	217 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	UTS2B	Q765I0	119 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	FAM58A	Q8N1B3	248 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	KLHDC1	Q8N7A1	406 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	C11orf44	Q8N8P7	122 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	OR11H6	Q8NGC7	330 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	RPS4Y2	Q8TD47	263 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	PYDC1	Q8WXC3	89 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	ADAT3	Q96EY9	351 aa	Predicted RBP	10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	MRPL48	Q96GC5	212 aa	Known RBP	10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	CDCA4	Q9BXL8	241 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	SEBOX	Q9HB31	216 aa	Predicted RBP	10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	PITPNC1	Q9UKF7	332 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	FOXJ3	Q9UPW0	622 aa		10.08	□□□□□ -0.8
SREBF1-215	ENST00000487401	ODF3B	A8MYP8	253 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401		J3QLW9	94 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	CHST1	O43916	411 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	HTR1A	P08908	422 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	CALCB	P10092	127 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	ZNF19	P17023	458 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	PRKACA	P17612	351 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	BCL3	P20749	454 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	AZGP1	P25311	298 aa	Known RBP	10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	DUSP1	P28562	367 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	NPBWR2	P48146	333 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	SNU13	P55769	128 aa	Known RBP	10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	SNRPG	P62308	76 aa	Known RBP	10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	ZIK1	Q3SY52	487 aa	Predicted RBP	10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	SLC25A30	Q5SVS4	291 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	ZNF626	Q68DY1	528 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	LHFPL2	Q6ZUX7	228 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	ZNF676	Q8N7Q3	588 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	NDNF	Q8TB73	568 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	MYCBP	Q99417	103 aa	Predicted RBP	10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	CHST6	Q9GZX3	395 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	NEK6	Q9HC98	313 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	RBFOX1	Q9NWB1	397 aa	Known RBP	10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	FRRS1L	Q9P0K9	344 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	TCF19	Q9Y242	345 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	PCDHGB5	Q9Y5G0	923 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	LINC00312	Q9Y6C7	94 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	SESN1	Q9Y6P5	492 aa		10.07	□□□□□ -0.8
SREBF1-215	ENST00000487401	VWF	P04275	2813 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	IGKV1-9	A0A0C4DH69	117 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	TRBV2	A0A0J9YWF9	115 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401		A6NDX4	124 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	EI24	O14681	340 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	SH2D1B	O14796	132 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	MGST3	O14880	152 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	IGHA1	P01876	353 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	ISG15	P05161	165 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	ALPL	P05186	524 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	CCR9	P51686	369 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	ACTA2	P62736	377 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	ACTG2	P63267	376 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	ZNF91	Q05481	1191 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	SLC34A1	Q06495	639 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	PDZK1IP1	Q13113	114 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	ZNF146	Q15072	292 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	SPIN3	Q5JUX0	258 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	MINOS1	Q5TGZ0	78 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	FDX2	Q6P4F2	183 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	ZBTB49	Q6ZSB9	765 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	TRAPPC6B	Q86SZ2	158 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	C1QL4	Q86Z23	238 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	DYNAP	Q8N1N2	210 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	ACBD7	Q8N6N7	88 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	TPRX1	Q8N7U7	411 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	OR52N4	Q8NGI2	321 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	OR13C3	Q8NGS6	347 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	RNF166	Q96A37	237 aa	Predicted RBP	10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	SPSB1	Q96BD6	273 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	HRASLS5	Q96KN8	279 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	MBOAT4	Q96T53	435 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	IL36RN	Q9UBH0	155 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	HHLA2	Q9UM44	414 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	GSTK1	Q9Y2Q3	226 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	HILPDA	Q9Y5L2	63 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	MINOS1-NBL1	R4GNA1	71 aa		10.06	□□□□□ -0.8
SREBF1-215	ENST00000487401	FUOM	A2VDF0	154 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401		J3QRE1	110 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	SIRPB1	O00241	398 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	F2RL2	O00254	374 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	PSPN	O60542	156 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	PEX14	O75381	377 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	ALDH3A2	P51648	485 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	P2RX3	P56373	397 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	NANOS3	P60323	173 aa	Known RBP	10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	ZFP1	Q6P2D0	407 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	CCBE1	Q6UXH8	406 aa	Predicted RBP	10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	TMEM219	Q86XT9	240 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	OR4S1	Q8NGB4	309 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	CFHR4	Q92496	578 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	RFT1	Q96AA3	541 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	C4orf36	Q96KX1	117 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	OPALIN	Q96PE5	141 aa		10.05	□□□□□ -0.8
SREBF1-215	ENST00000487401	PRSS22	Q9GZN4	317 aa		10.05	□□□□□ -0.8

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