RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 RAB13P51153 203 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 AQP4P55087 323 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 ERVK11-1P61568 191 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 ROM1Q03395 351 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 LDLRAD2Q5SZI1 272 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 MINOS1Q5TGZ0 78 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 Q6ZSR3 168 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 MOB3CQ70IA8 216 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 KRT77Q7Z794 578 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 ENTHD1Q8IYW4 607 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 OR4M1Q8NGD0 313 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 ANKRD60Q9BZ19 345 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 PBOV1Q9GZY1 135 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 SEBOXQ9HB31 216 aaPredicted RBP10.47□□□□□ -0.73
HDAC6-227ENST00000485102 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.47□□□□□ -0.73
HDAC6-227ENST00000485102 ABCB10Q9NRK6 738 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 NUFIP1Q9UHK0 495 aaKnown RBP10.47□□□□□ -0.73
HDAC6-227ENST00000485102 ENPP5Q9UJA9 477 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 MINOS1-NBL1R4GNA1 71 aa10.47□□□□□ -0.73
HDAC6-227ENST00000485102 RYR3Q15413 4870 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 PQLC2LA1A4F0 135 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 EFCAB10A6NFE3 127 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 DHRS3O75911 302 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 CD33P20138 364 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 AZGP1P25311 298 aaKnown RBP10.46□□□□□ -0.73
HDAC6-227ENST00000485102 HAAOP46952 286 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 ISL1P61371 349 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 ACTA2P62736 377 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 BLCAPP62952 87 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 ACTG2P63267 376 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 SSX2Q16385 188 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 ZNF684Q5T5D7 378 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 PLCXD3Q63HM9 321 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 ZNF782Q6ZMW2 699 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-227ENST00000485102 Q6ZS46 218 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 ZNF679Q8IYX0 411 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 OR51E1Q8TCB6 317 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 NRG4Q8WWG1 115 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 GPR84Q9NQS5 396 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 MRPS18AQ9NVS2 196 aaKnown RBP10.46□□□□□ -0.73
HDAC6-227ENST00000485102 CNOT2Q9NZN8 540 aaKnown RBP10.46□□□□□ -0.73
HDAC6-227ENST00000485102 PIGLQ9Y2B2 252 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 TPRKBQ9Y3C4 175 aa10.46□□□□□ -0.73
HDAC6-227ENST00000485102 DHRS7CA6NNS2 312 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 H3BUI4 141 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 K7EIL1 84 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 SYNGR1O43759 233 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 ENTPD6O75354 484 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 ZNF737O75373 536 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 PEX14O75381 377 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 SULT1C4O75897 302 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 NXPH2O95156 264 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 DUS4LO95620 317 aaKnown RBP10.45□□□□□ -0.74
HDAC6-227ENST00000485102 ARG1P05089 322 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 IGHV1-8P0DP01 117 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 PIPP12273 146 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-227ENST00000485102 IGLL1P15814 213 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 GABRB1P18505 474 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 MYL12AP19105 171 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 MYF6P23409 242 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 DCKP27707 260 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 MEF2CQ06413 473 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-227ENST00000485102 DMRTC1Q5HYR2 192 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 CLVS2Q5SYC1 327 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 PLEKHG7Q6ZR37 379 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 C16orf82Q7Z2V1 217 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 FAM220AQ7Z4H9 259 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 TMEM219Q86XT9 240 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 OR5AU1Q8NGC0 362 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 RCC1LQ96I51 464 aaKnown RBP10.45□□□□□ -0.74
HDAC6-227ENST00000485102 ZNF488Q96MN9 340 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 YTHDF1Q9BYJ9 559 aaKnown RBP10.45□□□□□ -0.74
HDAC6-227ENST00000485102 MOB1AQ9H8S9 216 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 PLCXD1Q9NUJ7 323 aa10.45□□□□□ -0.74
HDAC6-227ENST00000485102 F2RL2O00254 374 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 DENRO43583 198 aaKnown RBP10.44□□□□□ -0.74
HDAC6-227ENST00000485102 MRPS14O60783 128 aaKnown RBP10.44□□□□□ -0.74
HDAC6-227ENST00000485102 MPIG6BO95866 241 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 TTRP02766 147 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 KRT8P05787 483 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 CHRM2P08172 466 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 CCDC159P0C7I6 412 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 VDAC2P45880 294 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-227ENST00000485102 CEBPDP49716 269 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-227ENST00000485102 OR12D2P58182 307 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 IL24Q13007 206 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 ZNF829Q3KNS6 432 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-227ENST00000485102 SLC35F2Q8IXU6 374 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 ACBD7Q8N6N7 88 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 MYDGFQ969H8 173 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 RNFT2Q96EX2 444 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 PKIBQ9C010 78 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 EXOGQ9Y2C4 368 aaKnown RBP10.44□□□□□ -0.74
HDAC6-227ENST00000485102 V9GYS6 101 aa10.44□□□□□ -0.74
HDAC6-227ENST00000485102 DAPL1A0PJW8 107 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 CCDC182A6NF36 153 aa10.43□□□□□ -0.74
HDAC6-227ENST00000485102 SRSF10O75494 262 aaKnown RBP10.43□□□□□ -0.74
HDAC6-227ENST00000485102 DBTP11182 482 aaKnown RBP10.43□□□□□ -0.74
HDAC6-227ENST00000485102 RIDAP52758 137 aaKnown RBP10.43□□□□□ -0.74
HDAC6-227ENST00000485102 HCCSP53701 268 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms